Bleaching and Related
Ecological Factors
CRTR Working Group Findings 2004-2009
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Acknowledgements
The Bleaching Working Group is grateful for funding provided by the World Bank and the Global Environment Facility.
The members are also grateful for the effi cient administration of the project provided by Ms Melanie King, Ms Lianne Cook, and
members of the CRTR Project Executing Agency (PEA) at the University of Queensland. They thank Ms Catalina Reyes-Nivia for
coordinating the production of this report.
Contributing Authors: Ove Hoegh-Guldberg1, Yossi Loya2, John Bythell3, William Fitt4, Ruth Gates5, Roberto Iglesias-Prieto6,
Michael Lesser7, Tim McClanahan8, Robert van Woesik9, Christian Wild10
Cover Photo: Ove Hoegh-Guldberg
1University of Queensland, 2Tel Aviv University, 3University of Newcastle, 4University of Georgia, 5University of Hawaii, 6Universidad
Nacional Autónoma of México, 7University of New Hampshire, 8Wildlife Conservation Society, 9Florida Institute of Technology,
10University of Munich.
The Coral Reef Targeted Research & Capacity Building for Management (CRTR) Program is a leading international
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(Australia), the United States National Oceanic and Atmospheric Administration (NOAA) and approximately 50 research
institutes and other third-parties around the world.
Contact: Coral Reef Targeted Research & Capacity Building for Management Program,
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Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Contents
Foreword
4
Theme 2. Organismal mechanisms to
52
ecological outcomes
Introduction
6
Project 6. Population dynamics of coral
53
Reef-building corals: the framework
7
populations under environmental change
builders of coral reefs
Project 7. Effects of bleaching on
59
Human impacts on coral reefs
8
coral and fi sh communities in the
Western Indian Ocean and effects of
Coral bleaching and climate change
9
bleaching on coastal coral communities
Projections of change under rapid
13
in East Africa
climate change
Theme 3. Biomarkers of stress
65
What will be the state of the world's
17
Project 8. Biochemical stress markers
66
coral reefs in 2050?
in corals and Symbiodinium
Research directions 20
Project 9. Production of colour card tool
69
to detect and monitor coral bleaching
Member biographies 22
Theme 4. Projections of change and
71
Glossary 28
socio-economic impact
Project 10. Coral reefs in a century
72
Scientifi c outcomes 29
of rapid change: projections of change
Theme 1: Coral-symbiont responses
30
and effective responses
to thermal stress
Management implications 76
Project 1. Resolving the Adaptive
31
Bleaching Hypothesis
Contributions to policy development 79
Project 2. Understanding the
35
Impacts on local and regional policy
80
fundamental mechanisms of
development
coral bleaching
International climate change policy
82
Project 3. Geographical diversity of
40
symbiodinium
Research training 84
Project 4. Functional diversity of
43
Workshops and outreach 92
Symbiodinium (diversity and function)
Project 5. Host-symbiont mutualism,
47
Conclusions and future research 99
close associates, metabolic
communication and environmental
Research themes for the future 102
change
Invited presentations 104
Co-fi nancing 116
References cited 118
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Foreword
Coral reefs are the most biologically diverse marine ecosystems on Earth. In addition to their role in
providing habitat for over a million species, coral reefs also provide goods and services to over 500 million
people across tropical and subtropical regions. These provisions include food, building materials, income,
cultural benefi ts and the protection of coastlines from ocean waves. They also drive billion-dollar fi shery
and tourist industries, which provide much-needed income to communities and nations.
Unfortunately, the health of coral reefs is in steep decline, and studies over the past 40 years have indicated
coral cover decline by over 40% in many regions of the world. These changes have come about because
of the expanding activities of humans along the coastlines adjacent to coral reefs. These activities include
the overexploitation of reef species, destructive activities associated with tourism and fi shing, pollution and
declining water quality as urban areas, coastal agriculture, and aquaculture have expanded.
Climate change is now exacerbating the pressures on coral reefs, with increasing stress from elevated sea
temperatures and acidity as atmospheric carbon dioxide has increased. In 1998, coral reefs in all the world's
tropical regions experienced mass coral bleaching and mortality. Some regions lost over 90-95% of their
coral cover with an average loss of 17.7% of corals from reefs worldwide.
The devastation of coral reefs during this period triggered
a number of initiatives. One of these was the formation of
the IOC-UNESCO working group on coral bleaching,
which brought together a group of marine scientists to
explore the causes and solutions to the impacts of coral
bleaching. At the same time, the World Bank coastal
program began to evolve a research program aimed at
exploring the decline of coral reefs. The two initiatives
came together with the incorporation of the IOC-UNESCO
into one of six scientifi c Working Groups within the Coral
Reef Targeted Research & Capacity Building for
Management (CRTR) Program.
Following success with applications to the World Bank and
the Global Environment Facility (GEF), the CRTR began
Photo: A. Zvuloni
the fi rst phase of a 15 year project in 2004 which aims to
address knowledge and technology gaps, promote
learning and capacity building, and link scientifi c
knowledge to management and policy. The Bleaching
Working Group (BWG) has focused on key gaps in our
understanding of mass coral bleaching and related
ecological phenomena, and has pursued research projects
that range from establishing a better understanding of
why corals bleach and get diseased, to the impacts of
coral mortality on fi sh populations and human dependents.
The associated research has been conducted across four
Centres of Excellence (COE's) within the CRTR Program:
Heron Island (Australia), Zanzibar (Tanzania), Bolinao
(Philippines) and Puerto Morelos (Mexico). In addition to
producing over 230 peer-reviewed papers, the BWG has
Photo: A. Zvuloni
trained 17 postgraduate students and has supported many
more through its regional workshops and research projects.
4
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
While the contribution of new knowledge and
understanding of the impacts of global climate change by
the BWG has been signifi cant, the project has also
contributed to a series of new technologies useful to the
management of coral reefs. Development of low cost
colour cards for detecting bleaching (in partnership with
Justin Marshall and Uli Seibeck at the University of
Queensland) as well as ecological methods for detecting
sub-chronic change on coral reefs will provide important
contributions. The ecological studies undertaken by the
BWG, for example, produced a `Common Sampling
Protocol' outlining ecological techniques used at all
Centres of Excellence. These techniques allowed us to
determine which vital rates were responsible for the state
Photo: A. Zvuloni
of the reef and allowed us to derive novel yet pragmatic
models that predict population changes and the future state of the reefs. It is expected that these
contributions will fl ow naturally into the more applied program of the second phase of the CRTR Program.
The BWG has also played a very signifi cant role in infl uencing policy development at a national and
international level. Papers such as that published by BWG members in December 2007 (now ISI's hottest
and most cited paper over the past two years in the areas of "climate change" and "ocean acidifi cation")
are playing an important role in the climate change issue. The results of papers like this are playing very
signifi cant roles in helping policy makers understand the serious consequences of approaching or exceeding
atmospheric carbon dioxide concentrations of 450 ppm. Attendance of members of the BWG at the recent
Copenhagen conference, visits by the Chair to Capitol Hill and a strong presence at the recent World
Oceans Conference in Manado, Indonesia, have ensured that the results of the research are now being
included in many of the discussions that are occurring as we lead up to crucially important climate change
COP15 negotiations in Copenhagen at the end of 2009.
This fi nal report describes the scientifi c outcomes, major training achievements, and the outreach activities
and outputs undertaken by the BWG within the CRTR Program. Most importantly, this report describes a
series of exciting and innovative contributions to the understanding of how climate change is, and will,
affect the world's most diverse and important marine ecosystem. We hope that you will enjoy reading
about the activities and contributions from the BWG over the past fi ve years (2004-2009).
Ove Hoegh-Guldberg
Yossi Loya
Y
(Chair, BWG)
(Co-Chair
h , BWG)
5
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Coral reefs play critically important roles as sources of income and resources
from fi shing, tourism, building materials, coastal protection and biodiscovery
(Bryant 1998; Hoegh-Guldberg et al. 2009). They also have signifi cant
cultural and spiritual value to coastal communities, which often include some
of the most disadvantaged people who are heavily dependent on marine
resources (Bryant 1998). Approximately 15% of the world's population (0.5
billion people) live within 100 km of coral reef ecosystems (Pomerance et al.
1999). Coral reefs play a vital role in directly supporting at least 500 million
people worldwide, despite only representing 0.1% of the world's ocean
area. The Coral Triangle in south-east Asia, for example, includes over 100
million people who are almost entirely dependent on coastal resources
(Hoegh-Guldberg et al. 2009). In many cases, the precise evaluation of these
resources is hard to defi ne given that much of it is associated with providing
food to people who forage in shallow coastal waters for food and involve
commodities that do not involve monitored fi sheries or markets.
Photo: T. McClanahan
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
In addition to direct support to subsistence fi shers, commercial fi shing in the rich waters of coral reefs sustains
25% of the total annual fi sh catch globally (Moberg and Folke 1999). In regions like the Coral Triangle,
fi sheries (including aquaculture) earn over $10 billion each year in exports (Hoegh-Guldberg et al. 2009).
Coral reefs also provide a rich source of income from tourism, with people travelling thousands of miles, in
many cases, to dive, fi sh and swim in the scenic locations offered by coral reefs. Reef associated tourism, for
example, adds $89 billion to the gross development product (GDP) of the Caribbean region (Jameson et al.,
1995 cited by Pomerance 1999). In Australia, tourism generated by the Great Barrier Reef brings in over
$5 billion per annum and employs over 65,000 people (Hoegh-Guldberg and Hoegh-Guldberg 2004).
The extraordinarily high biodiversity of coral reefs is inherently diffi cult to value formally. The sheer scale of
coral reef biodiversity, with its thousands of unexplored gene pools, perhaps negates the need to calculate
this formally. About 100,000 species have been described from the world's 375,000 km2 of coral reef. This is
a tiny fraction of an estimated 0.5 to 2.0 million species that live on coral reefs (Spalding et al. 2001).
Other estimates range as high as 9 million species being associated with coral reefs (Reaka-Kudla 1997).
This biodiversity has an increasing value as a storehouse of potential novel compounds. Recent advances in
the molecular sciences (e.g. robotic sequencing and screening, microarrays and molecular databases) are
making gene and pharmaceutical discovery many hundreds of times faster than it was even a decade ago.
New medicines, chemicals and materials can be realistically discovered within these vast ecosystems.
Economic wealth is being built upon these discoveries (e.g. conotoxins from Conus sp., (Livett et al. 2004);
pocilloporin from reef cnidarians (Dove et al. 2001); anti-cancer drugs from sponges (Wallace 1997). While
this exploration is in its infancy, it is signifi cant to note that half of the potential pharmaceuticals being
explored at present are from the oceans, and many of these are from coral reef ecosystems. It should be
recognised that while corals and their allies (cnidarians) were one of the earliest multicellular animal groups
to evolve, their genome is as large and complex as humans (Miller et al. 2007). The original forms and
functions of genes that were later adapted by mammals might therefore be determined from cnidarians.
Coral reefs are valuable in ways that are often unappreciated. By reducing the force of ocean waves, corals
reefs provide critical protection along tropical coastlines over the planet. This protection is critical for coastal
cities and towns, and for other ecosystems such as sea grass and mangrove communities that require calm
waters in which to grow and proliferate. For example, Hurricane Wilma, which sat over Cancun for 36 hours
in October 2005, generated 12-14 m waves on the outer reef which were reduced by the reef barrier to 3 m
waves within the lagoon (Ruíz, Escaleante and Iglesias-Prieto, unpublished data). The role of coral reefs in
protecting coastlines was also clearly demonstrated across areas affected by the Asian Tsunami of December
29, 2004. In this devastating event, coastal regions lacking a well-developed coral reef in front of them
suffered the greatest damage. Physical protection aside, coral reefs and associated habitats such as mangroves
also have enormous value as critical nursery grounds within the network of coastal habitats (Mumby et al.
2004). Many commercially important species spend their early life-history stages in these rich habitats.
Reef-building corals: The framework builders of coral reefs
Reef-building corals are critical to coral reef ecosystems and are unique in being a mutualistic symbiosis
between a simple multicellular animal and a single-celled dinofl agellate protist. The greatest diversity of reef-
building corals is located closest to the equator. Light, temperature and the carbonate alkalinity of seawater
decrease in a poleward direction, making the formation of carbonate reefs more diffi cult at higher latitudes
(Kleypas et al. 1999a). In many ways, the productivity and biodiversity of coral reefs is at odds with the
nutrient depleted waters of the earth's tropical oceans. Starting with Charles Darwin, visitors to coral reefs
have marvelled at how these productive ecosystems exist
in waters that otherwise support only the most sparse
phytoplankton populations (Darwin 1842; Odum and
Odum 1955). Coral reefs support, or did in the past
(Jackson et al. 2001b), massive populations of fi shes,
birds, turtles and marine mammals (Maragos et al. 1996).
Akin to the cactus gardens of tropical nutrient deserts,
coral reefs tightly recycle nutrients between often closely
associated mutualistic partners. This has been identifi ed
as the key feature that allows coral reefs to maintain high
productivity in this otherwise desolate setting of tropical Figure 1. A. Polyps of the reef-building coral Goniopora
tenuidens (scale bar = 2 cm) B. Symbiodinium from tentacle
7
oceans (Muscatine and Porter 1977; Hatcher 1988).
squash of G. tenuidens (scale bar = 50 m).
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Reef-building corals are fundamentally important to coral reefs and are responsible for the framework of
coral reefs. This framework is in turn cemented together via the activity of calcareous algae to create habitat
for thousands of animals, plants, fungi and protists. Much of the diversity of coral reefs depends on their
three-dimensional topography and complexity. Reef-building corals live in a mutualistic symbiosis with
single-celled dinofl agellate algae from the genus Symbiodinium (Trench 1979). These tiny (8-10 m in
diameter) plant-like protists live inside the cells of the coral host and photosynthesize in the light. Instead
of retaining the sugars and amino acids that result from this activity for their own growth and reproduction,
Symbiodinium export more than 95% of their photosynthetic production to the coral host (Muscatine
1967,1990). In return, Symbiodinium have direct access to the waste products of animal metabolism, which
are lacking in the surrounding waters. The close association of animal (heterotroph) and plant (phototroph)
means that the problem of nutrient/particle dilution within a nutrient-poor water column is avoided.
The success of coral reefs in the otherwise nutrient deserts of tropical oceans is seen as a direct consequence
of the mutualism exemplifi ed by corals and their Symbiodinium (Muscatine and Porter 1977). More recently
it has been recognised that reef corals also engage in close associations with a range of micro-organisms
including cyanobacteria (Lesser et al. 2007b) and in total, the association is termed the coral `holobiont'
(Rohwer et al. 2002).
All reef-building corals were thought to contain a single species of symbiotic dinofl agellates called
Symbiodinium microadriaticum (Freudenthal 1962; Taylor 1974). Starting with Robert Trench and associates
at the University of California at Santa Barbara (Trench 1979; Schoenberg and Trench 1980c,a,b), this view
changed however, as results accumulated that showed that Symbiodinium in reef-building corals was a
collection of many taxa (Rowan et al. 1997; Loh et al. 2001). A recent survey (done as part of the World Bank
Block B activities associated with the current project) of the molecular identity of symbionts from 86 host
species from the Great Barrier Reef representing 2 genera from Class Hydrozoa, 6 genera from Subclass
Alcyonacea, and 32 genera from Subclass Zoantharia (28 Scleractinian, 1 Actiniarian, 2 Zoanthidean,
and 1 Coralimorpharian) revealed at least 23 distinct types of Symbiodinium (LaJeunesse et al. 2003).
Many hosts may also have 2 or more genetic varieties of Symbiodinium in their tissues. Several research
groups have tried to link this diversity to the different tolerances between reef-building corals, albeit
without much success. Given the importance of understanding why some corals differ in their sensitivity to
thermal stress, understanding the diversity of Symbiodinium and how it relates to climate-change impacts
is a major objective of the Bleaching Working Group.
Human impacts on coral reefs
Coral reefs have persisted for over 200 million years even
after global catastrophes that caused mass extinction, such
as that which occurred 65 million years ago. They show
enormous resilience in geological time (i.e. over millions to
tens of millions of years). Paradoxically then, coral reefs
appear to be highly sensitive to the increased pressure that
human activity has brought to bear on them. Global surveys
of coral reef health indicate that coral reefs are in decline in
almost all areas of the world (Bruno and Selig 2007;
Wilkinson 2008). The implications for global biodiversity
and functional coral reef ecosystems are likely to be severe
if these trends continue.
A range of human activities have impacts on coral reefs. These are listed with a brief description in Table 1.
Understanding these stressors (especially the interactions) is critical if we wish to develop strategies to
reduce or even reverse the current rapid decline in coral reef health across the world's tropical oceans.
8
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Coral bleaching and climate change
The algal symbionts of reef-building corals exist at high densities within the host tissues. Under normal
conditions, the population densities of symbionts range from between 0.5 to 5 x 106 cells cm2 of host
surface (Drew 1972). Reef-building corals maintain low rates of migration or expulsion of their symbionts to
the water column (Hoegh-Guldberg et al. 1987). Symbiotic dinofl agellate population densities in the coral
vary in response to seasonal changes in light and temperature (Jones 1997a; Fagoonee et al. 1999; Fitt et
al. 2000). These changes represent gentle adjustments between the two symbiotic partners to optimize
their integrated physiological performance as the environment changes.
Under a variety of stresses, abrupt changes can occur to the density of Symbiodinium in symbiotic corals and
other invertebrate hosts (Brown and Howard 1985; Hoegh-Guldberg and Smith 1989). These stresses include
changes in salinity (Goreau 1964; Egana and DiSalvo 1982), light (Vaughan 1914; Yonge and Nichols 1931;
Hoegh-Guldberg and Smith 1989; Lesser et al. 1990; Gleason and Wellington 1993), toxin concentrations
(e.g. cyanide, (Jones and Hoegh-Guldberg 1999); copper ions (Jones 1997b), microbial infection (e.g. Vibrio,
(Kushmaro et al. 2001) or temperature (Coles and Jokiel 1977; Coles and Jokiel 1978; Hoegh-Guldberg and
Smith 1989; Glynn and D'Croz 1990). This phenomenon has been referred to as `bleaching' because corals
rapidly lose their brown colour (because of the Symbiodinium) and turn a brilliant white, because most of the
pigments are gone and the white calcareous skeleton is revealed (Figure 1A, B).
Bleaching at local scales (10-1000 m2) has been recorded for almost a century (e.g. Yonge and Nichols 1931).
Bleaching at larger geographical scales, however, is a relative new phenomenon. Prior to 1979, there are no
formal reports of mass coral bleaching in the scientifi c literature. Since that date, however, the number of
reports has risen dramatically. Mass bleaching events have a number of possible outcomes. In mild cases,
reefs will recover their colour within months. At the other end of the spectrum, mass bleaching events can
result in large numbers of corals dying across vast areas of coral reef. In 1998, for example, coral reefs off the
Australian coastline recovered from wide-spread bleaching, with minimal loss of reef-building coral
(Berkelmans and Oliver 1999). In the same year, reef communities lost up to 95% of their corals across large
areas of the Indian Ocean, Palau, Okinawa and north Western Australia (Wilkinson and Hodgson 1999).
While localized bleaching can arise as a result of any number of stresses, mass coral bleaching is tightly
correlated with short excursions of sea temperature above summer maxima. Over the past 20 years, there
have been six major global cycles of coral bleaching ("mass coral bleaching events"). A combination of the
intensity and length of periods of elevated sea temperature provides an accurate prediction of mass coral
bleaching and mortality (Strong et al. 1996b; Strong et al. 2006a). Thermal thresholds for bleaching
generally begin at approximately 1°C above the sea temperature maxima for a region, but will vary with
latitude, species, clone, other physical factors (e.g. light and water fl ow rate) and history (Edmunds 1994;
Jones et al. 1998; Hoegh-Guldberg 1999a; Coles and Brown 2003). Understanding the sources of this
variability was a major objective of the fi rst fi ve years of the research program of the Bleaching Working
Group (BWG).
Despite this secondary source of variability, satellite measurements of sea-surface temperature anomalies
can be used to predict bleaching events several weeks in advance with more than 90% accuracy (review:
Hoegh-Guldberg 1999). Sea surface temperature measurements also appear to deliver information on the
intensity and outcome of bleaching events. Table 2 outlines information from the global event in 1998 in
which anomaly intensity and exposure duration were multiplied together to give a degree heating month
(akin to degree heating weeks of Strong et al 2000; see also Hotspot program, coordinated by the United
States National Oceanic and Atmospheric Administration, NOAA: http://orbit-net.nesdis.noaa.gov/orad/
coral_bleaching_index.html). The four sites that experienced major post-bleaching mortalities had three-
fold higher degree heating month indices. While there is some fi ne-tuning that needs to be done with
regard to the infl uence of other factors (e.g. Mumby et al. 2001; Berkelmans 2002; Berkelmans 2006 ), the
relationship between sea surface temperature (SST) anomalies and exposure time gives a strong indication
of the bleaching progression to mortality as heat stress increases over the next century. Signifi cantly,
Hoegh-Guldberg (2000) has pointed out that a doubling of CO (IS92a scenario) will lead to `degree heating
2
months' in most tropical regions over three-fold higher than those previous increases which caused large
scale mortality events in Palau, Okinawa, Seychelles and Scott Reef.
9
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Heat stress and mechanisms of coral bleaching
There is a considerable amount of information on the underlying physiological mechanisms involved in
coral bleaching. Coles and Jokiel (1977) were among the fi rst researchers to investigate heat stress in reef-
building corals during a project looking at the affect of heat effl uent fl owing from a power plant in Kaneohe
Bay in Hawaii. Coles and Jokiel (1977) noted that corals that were warmer than normal were bleached.
Those that were warmest soon died. In their investigation of the physiology of heat stressed corals, they
noted the rapid reduction in photosynthetic activity early in the bleaching syndrome. Some of this decrease
was due to reduced Symbiodinium numbers as the corals bleached. However, subsequent work has
revealed that photosynthetic decreases occur prior to the onset of the loss of Symbiodinium (Hoegh-
Guldberg and Smith 1989; Iglesias-Prieto et al. 1992 -a; Fitt and Warner 1995; Warner et al. 1996; Jones et
al. 1998). Heat stressed corals develop an increased susceptibility to the phenomenon of photoinhibition,
which is very similar to the mechanisms that are faced by all plants when they become temperature stressed.
This mechanism, in which light becomes a liability, also explains the important role that light plays as a
secondary factor (Iglesias-Prieto et al. 1992 -b; Jones et al. 1998; Hoegh-Guldberg 1999a). Resolving the
detail of the mechanism underlying coral bleaching and understanding the role of secondary factors like
light and fl ow regimes, are major research goals of the current project.
A key observation regarding heat stress in reef-building corals is that not all corals are equally sensitive to
temperature. Corals with thicker tissues (e.g. Porites spp., and Goniopora spp.) tend to be more tolerant
than corals that have thinner tissues (e.g. Acropora spp., Stylophora spp., Pocillopora spp.). Some species
of Symbiodinium may also be more thermally tolerant although the evidence is equivocal at this point
(Hoegh-Guldberg 1999). The thermal threshold above which corals and their symbionts will experience
heat stress and bleaching also varies geographically, indicating that corals and Symbiodinium have evolved
over evolutionary time to local temperature regimes (Coles et al. 1976), (Table 2, Hoegh-Guldberg 1999).
Table 1. Principal threats to coral reefs worldwide. References are intended as samples of key literature and are
not meant to be exhaustive. Further details on these threats can be gained from Bryant et al. (1998), Spalding et al. (2002)
or from Wilkinson (1999)
Activity
Description
Reference
Coastal
Expansion of urban centres, townships, tourist activities, shipping, aquaculture
(Bryant et al. 1998; Wong
development
and agricultural activities have resulted in major changes to coastal regions.
1998; White et al. 2000;
This has in turn led to increased amounts of sediments and nutrients entering
Harborne et al. 2001;
coastal waters, which has triggered the pollution, algal overgrowth and
McClanahan et al. 2001;
outbreaks of coral predators such as the Crown-of-Thorns Starfi sh.
Lipp et al. 2007)
Overexploitation
Both local subsistence fi shers and fi shing industries are putting large pressures
(Hughes 1994; McManus
on fi sh stocks associated with coral reefs. As a result, many fi sh stocks are in
1997; Boersma and
major decline. Changes to reef community structure have occurred as functional Parrish 1999; White et al.
groups (herbivore and key predators) have disappeared.
2000; Jackson et al.
2001b)
Destructive fi shing
Destructive methods employed to catch fi sh have also had major impacts on
(Jones and Hoegh-
coral reefs. In many parts of the world, fi shermen use cyanide to poison, and
Guldberg 1999,2001;
dynamite to stun fi sh, often with devastating impacts on reef structure and
McClanahanan et al.
function.
2002; Edinger et al.
2008)
Marine-based
Chemicals and trash dumped by shipping or coastal developments leads to a
(Abelson et al. 1999;
pollution
build up of compounds that poison corals and associated organisms, as well as
Bastidas et al. 1999;
leading to the choking of fauna such as fi sh, turtles and dugongs. Another form Wilkinson 1999; Edinger
of trash of signifi cance is the discarded fi shing nets ("ghost nets"), which can
et al. 2000; Edinger et al.
continue to cause the death of thousands of fi sh long after decommissioning.
2008)
Climate change
Rising ocean temperatures and acidities are changing the conditions under
(Glynn 1991; Brown
which coral reefs have prospered for at least 740,000 years. In 1998 alone, a
1997; Hoegh-Guldberg
single worldwide episode of warmer than normal water temperatures, led to an
1999a; Done et al. 2003)
estimated 16% of the world's corals dying. This is seen by many as the number
one threat to coral reefs now as oceans undergo sustained warming over the
next century. Recent work in Australia and Thailand has revealed that coral
reefs are accreting at 15% of the rate that they were prior to 1980. This decline
is unprecedented in over 400 years of records available so far.
10
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Table 2. Comparison of recent Degree Heating Months and mass bleaching mortality estimates from incidents of bleaching
within the 1998 mass bleaching event (adapted from Hoegh-Guldberg 2002).
Severe events (mortality > 80%)
Location
Degree heating months
Mortality
Source
Palau
3.9
70-90%
J. Bruno, unpublished data
Seychelles
3.1
Up to 75%
Spencer et al. (2000)
Okinawa
3
90-95%
Loya et al. (2001)
Scott Reef
3
90-95%
L. Smith and A. Heyward,
unpublished data
Mean + 95% CI
3.2 + 0.47
Mild events (mortality < 10%)
Location
Degree heating months
Mortality
Source
Southern GBR (reef crest)
1.7
10-30%
(Jones et al. 2000)
Central GBR (inner reefs)
1.4
1-16%
Marshall and Baird (2000)
Moorea (outer reef crest)
0.9
0% mortality
Personal observation
(10% bleached)
Cook Is (Southern; reef crest)
0.4
0% mortality
Personal observation
(5% bleached)
Mean + 95% CI
1.1 + 0.49
Corals closer to the equator have thermal thresholds for
bleaching that may be as high as 31°C while those at
30
higher latitudes may bleach at temperatures as low as
29
26°C. Thresholds may also vary seasonally. Berkelmans
28
and Willis (1999) revealed that the winter maximum upper
27
thermal limit for the ubiquitous coral Pocillopora
26
damicornis was 1°C lower than the threshold for the same
25
species of coral in summer. These shifts are evidence of
24
thermal acclimation, a physiological adjustment that can
23
Sea Surface Temperature (°C)
occur in most organisms up to some upper or lower
22 1982 1983 1984 1985 1986 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996 1997 1998 1999 2000 2001 2002
thermal limit.
Why corals are sitting so close to their thermal threshold
Year
Figure 2. Sea surface temperatures and triggers for coral
for bleaching has been a subject of considerable interest bleaching for offshore reefs near Townsville, central
given the importance of adaptation in future scenarios. Great Barrier Reef (latitude 18.3S, longitude 146.3E).
The explanation is also important to perspectives as to Dataset from the Comprehensive Ocean Atmosphere
why mass bleaching events appear to be more frequent Data Set (COADS) and satellite observations (1990
and intense. Several factors are involved in the latter. The present), compiled from operational data produced by
the National Environmental Satellite, Data and
fi rst factor involved is the increase in tropical/subtropical Information Service (NESDIS). Horizontal dashed line
sea temperatures over the past 100 years. Tropical and indicates the thermal threshold for 3-4 week exposure
subtropical oceans are about 0.71.0°C warmer (minimum times (Hoegh-Guldberg 1999). Arrows indicate when
estimate, some estimates range up to 2°C) than they were bleaching was reported on the Great Barrier Reef
100 years ago (Hoegh-Guldberg 1999a; Lough 2000).
(emphasized arrows indicate years in which intense
bleaching occurred).
The second factor is associated with the timing and
intensity of El Niño Southern Oscillation (ENSO) events
(Glynn 1988,1991; Glynn 1993; Hoegh-Guldberg 1999a).
11
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
The effect of these events is that they combine to produce short periods during the summer months in
which sea temperatures rise above the thermal tolerance of reef-building corals and their Symbiodinium.
The last factor is the apparent stability of the thermal threshold of corals. It appears that rates of adaptation
to changing conditions over the past 30 years are much slower than the rate of increase in stress levels
affecting coral reefs. This is a critical observation that underpins the development of projections of the
future for reef systems.
Mortality estimates of reef-building corals following bleaching
As discussed above, mortality following mass bleaching ranges from zero, in cases of mild bleaching,
to close to 100% as seen at many sites in recent global events (Table 2; (Wilkinson and Hodgson 1999).
The Global Coral Reef Monitoring Network, GCRMN (supported by more than 30 countries, IOC-UNESCO,
UNEP, IUCN and the World Bank) has produced a series of annual reports on the state of coral reefs since
the mid 1990s. These reports, though of varying qualities, are an attempt to get a yearly snapshot of coral
reef health across the planet. The numbers from 1997 to 1998 (Table 3) indicate the scale of mortality that
can occur in a global cycle of mass coral bleaching. Prior to 1998, the GCRMN surveys reported a loss of
9.5% of living corals from six regions. During 1998, one of the warmest years on record, regions lost an
average of 17.7% of their living reef-building corals. The range of mortality estimates is perhaps the most
interesting detail hidden within the average. While some regions (e.g. Australia and Papua New Guinea)
lost an estimated 3%, regions like the Arabian Gulf and Wider Indian Ocean lost 33% and 46% respectively
during the single event in 1998.
Table 3. Summary of net estimates of the disappearance of reef-building corals during surveys carried out by the
Global Coral Reef Monitoring Network (adapted from GCRMN 2000).
Location
% destroyed pre 1998
% destroyed in 1998
Arabian Region
2
33
Wider Indian Ocean
13
46
Australia, Papua New Guinea
1
3
Southeast & East Asia
16
18
Wider Pacifi c Ocean
4
5
Caribbean Atlantic
21
1
Average (region)
9.5
17.7
The novelty of recent changes on coral reefs is an important part of understanding global events. Several
studies have looked into the past behaviour of reefs and have come up with some compelling data that
indicates that recent mass mortalities of the 1990s have not been seen for at least the last 3,000 years.
Acropora cervicornis, for example, was a dominant species across the central shelf lagoon of Belize up until
20 years ago. In the 1980s, however, disease (white-band disease) resulted in almost the complete mortality
of A. cervicornis. Stands of the foliose (scroll-like) coral Agaricia tenuifolia quickly replaced A. cervicornis in
the early 1990s but were wiped out by the high-water temperatures of 1998. The mortality of A. cervicornis
in the 1990s left an unambiguous layer of coral branches in the sediments of reefs throughout the Caribbean.
Investigation of reef deposits reveals that the scale of these mortality events appears to have been unique
in the past 3,000 years (Aronson et al. 2002). Indeed, Aronson and his colleagues analysed 38 cores from
across the 375 km2 central lagoon basin and could not demonstrate the existence of a similar layer in
sediment cores stretching back at least as far as 3,000 years ago. While the focus of Aronson et al. (2002)
was specifi cally responding to a disease event that may or may not have a direct relationship to thermal
bleaching, the results indicate that catastrophic events such as that which occurred in 1998 were extremely
rare or absent prior to industrialization.
12
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Chronic impacts of thermal stress
Often forgotten from the discussion of impacts of climate change on coral reefs are the chronic or sub-
lethal effects of thermal stress that may or may not be associated with bleaching and/or death. These may
be as important as changes in mortality and have the potential to bring about huge changes in growth,
calcifi cation and age structure. These in turn can fundamentally affect reef function, resilience and survival.
Reef-building corals that experience thermal stress have reduced growth, calcifi cation and repair capabilities
(Goreau and Macfarlane 1990; Meesters and Bak 1993). Not surprisingly, as thermal stress reduces the
amount of photosynthetic activity and as Symbiodinium are lost from reef-building corals, the amount of
energy available for these fundamental processes is reduced. In addition, the amount of energy available
for reproduction is also potentially compromised under thermal stress. Coral species utilise a variety of
reproductive modes including brooding of larvae and broadcast spawning of gametes for external
fertilisation (Harrison et al. 1984). Coral reproduction is generally sensitive to stress (Harrison and Wallace
1990) and measures of reproductive output or fecundity can be used as indicators of reactions to various
stressors such as mechanical damage (Ward 1995), nutrients (Tomascik and Sander 1987; Harrison and
Ward 2001; Koop et al. 2001; Ward et al. 2002) and oil (Guzman and Holst 1993).
The evidence for the sub-chronic impact of thermal stress on reef-building corals is very strong. Mass coral
bleaching has been reported to affect coral reproduction. Szmant and Gassman (1990) examined a limited
number of corals (due to marine park restrictions) following a bleaching event in Florida in 1987 and found
that bleached colonies did not complete gametogenesis in the season following the bleaching event. They
also found that bleached colonies had 30% less tissue carbon and 44% less tissue nitrogen biomass per
skeletal surface area than unbleached colonies. Harrison and Ward (2001) and Koop et al. (2001)
demonstrated a failure of gametogenesis in a large number of corals that were affected in the southern
Great Barrier Reef by the 1998 mass-bleaching event. This is similar to observations made for soft corals by
Michalek-Wagner and Willis (2001). They also demonstrated that fertilization, settlement and juvenile
growth were all compromised at the end of 1998, even though the bleaching event occurred in March of
that year. The implications for reef dynamics are considerable as recovery of affected reefs can be heavily
dependent on larval recruitment. There are a growing number of observations that have linked low levels
of larval recruitment to earlier periods of thermal stress on coral populations. For example, severe bleaching
also occurred on the Western Australian coast in 1998 and was followed by a year of failed recruitment at
Scott Reef (L. Smith, Australian Institute of Marine Science, pers. comm.). Because of the importance of this
linkage within the biology of reef-building corals, a major focus was placed on the sub-chronic impacts of
thermal stress (e.g. on growth and reproduction) within the fi rst fi ve years of the project. The general effect
of increasing stress on other aspects such as disease susceptibility, age structure and ecological traits such
as partial-colony mortality was also explored.
Projections of change under rapid climate change
The conditions under which coral reefs have prospered are changing rapidly. Global temperatures and
carbon dioxide concentrations are now higher than they have been for at least the last 400,000 years. There
is now very strong evidence that coral reefs have already experienced major impacts from climate change.
Current projections of changes to the earth's climate suggest that sea temperatures may be 2-5°C higher
by 2100 than they are right now. Some studies suggest that tropical and sub-tropical reefs will not be coral
dominated by the middle of the current century (Hoegh-Guldberg 1999a; Hoegh-Guldberg 2002a; Done
et al. 2003; Hoegh-Guldberg 2004; Donner et al. 2007; Hoegh-Guldberg et al. 2007b). The implications of
these types of scenarios for tropical near shore communities and the humans that interact with them are
enormous and must be considered in any serious exercise to plan for the future.
Even under mild climate change scenarios, coral reefs will undergo major increases in coral bleaching and
mortality. Drawing together the responses of reef-building corals to El Niño Southern Oscillation (ENSO)
related excursions in sea temperature over the past 20 years, Hoegh-Guldberg (1999) derived a series of
simple thermal thresholds for a series of sites and compared these threshold values to future sea
temperatures. As discussed previously, some variation surrounds thermal thresholds because of the
infl uence of other secondary factors (e.g. light, history, exposure time). However, despite the infl uence of
these secondary factors, thermal thresholds can be used to predict bleaching events from passing satellites
13
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
and hence (for exposure times of 3-4 weeks) are fairly good indicators whether a reef will bleach or not
(Strong et al. 1996a; Strong et al. 2006b). Estimates of past and future sea temperatures were generated
by a range of General Circulation Models of areas of Tropical Ocean and compared to these threshold
values. From these analyses it is clear that sea temperatures under a doubling of atmospheric carbon
dioxide quickly rise above the known thermal stress thresholds of reef-building corals. When this is
combined with estimates of the atmospheric carbon dioxide content required to drive carbonate ion
concentrations down below levels necessary for maintaining calcifi cation and reef accretion, it becomes
apparent that we are headed for conditions on planet Earth in which coral reefs will struggle to survive as
functional ecosystems (Hoegh-Guldberg et al. 2009).
Biological consequences of declining coral reef health
While corals form a primary response, the biological consequences of thermal stress fall into two basic
categories. These are:
A. Reefs that bleach but recover: Reefs that experience 0.5 Degree Heating Months (DHM) during the
summer months will experience mass bleaching. They will recover if stress levels return to previous
levels. It is important to note that bleaching is just a visual sign of stress and that the recovery of colour
does not imply that there have not been physiological consequences. As discussed above, these can
manifest themselves in the form of reduced growth and reproduction.
B. Reefs that experience almost total coral mortality: Reefs that are exposed to 3.2 DHM per year or more
will experience almost complete mortality of their coral populations. This is conservative as reefs
probably experience major mortality events at lower Degree Heating Month values (e.g. Scott Reef, 2.6
DHM in 1998; Table 2).
From here, we can assume that reefs that are experiencing bleaching every second year will also experience
a decrease in reef quality and that reefs with total mortality events three times per decade will be no longer
coral-dominated reefs. The latter is also conservative as coral communities take anywhere from 10-50 years
to recover after a mass mortality event. Consequently one event per decade (let alone three events) is
probably enough to tip the balance in favour of non-coral dominated systems. This was recently recognised
by Done et al. (2003) in a useful scheme that defi nes the types of ecological impacts on coral reefs with an
estimate of return times. "High level" and "catastrophic" ecological impacts each have return times of 20
and 50 years. Clearly, even three "High level" events per decade would clear reefs of coral cover (let alone
three "catastrophic" impacts which is probably closer to that posed by a 3.2 DHM event). Recent community
modelling work has reinforced this conclusion. Using a cellular automaton model developed for coral
communities, (Johnson et al. 2002) have demonstrated that merely having an event with a DHM value of
1.2 every 10 years into the next century is enough to reduce coral cover by 50%. Adding stress levels like
those seen when events (similar to that of 3.2 DHM) occur every 3-4 years produces outcomes in which
coral cover is extremely remnant (Johnson et al. 2002).
As part of the current project, present-day conditions were compared with those that have occurred over
the past 420,000 years (Hoegh-Guldberg et al. 2007a). This study revealed that current conditions on coral
reefs in terms of pH, carbonate ion concentrations and sea temperature are well outside those experienced
by corals in the past. Further analysis of the literature revealed that conditions are fast approaching critical
thresholds, one associated with high sea temperatures and the other approaching with the critical carbonate
ion concentration. The conclusion from this study was that coral reefs will soon become non-coral
dominated, with important consequences across the globe for the many millions of species that live on and
depend on corals. Naturally, these changes have serious consequences for the people and communities
that depend on coral reefs and other coastal ecosystems for their food and livelihood.
Important to evaluating these potential scenarios is an integration of the information generated from this
project on the underlying mechanisms, sources of variability and potential roles of adaptation and
acclimation. In integrating the knowledge across four sites in the world's tropical oceans, it is anticipated
that a stronger basis will be developed for understanding and projecting the changes that have been
proposed to occur. These perspectives on the nature and health of future reef systems under a warming
world are critical for human societies to assess the likely cost or plan adaptive responses to rapid climate
change in our tropical oceans.
14
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Escape clauses: can genetic adaptation save the day?
Faced with rising sea temperatures and corals with tolerances that are being exceeded, genetic adaptation
to these rising stress levels has been suggested as one scenario (Done 1999; Baker 2001a; Hoegh-Guldberg
2002b; Done et al. 2003; Baker et al. 2004). Simplistically, if thermal tolerance increased through adaptation
at the same rate as seawater temperature increased, the rate of coral bleaching and mortality would remain
constant and not increase (Hoegh-Guldberg 2002b). There is, however, no evidence of a rapid adaptive
response by reef-building corals to the increase in thermal stress. The problem, as outlined above, is that
the rates of environmental change may be much higher than the adaptive capacities of reef organisms.
The current growth of greenhouse gas concentrations is two orders of magnitude greater than even that
seen during the transitions from ice age to warm period. Future rates of change are predicted to be even
higher than those seen over the last hundred years.
There is also very little, if any, evidence that suggests that corals and their Symbiodinium have adapted to
the changes in sea temperature over the past 20 years. As mortality appears to be increasing not decreasing,
and thermal thresholds appear to be in similar places as they were 20 years ago, all evidence appears to
favour the suggestion that rates of change are exceeding the rates at which reef-building coral populations
can adapt. This is not surprising given that corals are largely slow growing, asexual organisms that are
involved in a complex intracellular symbiosis.
In future scenarios, dependence on the notion that more tolerant genotypes will arise via mutation is
extremely risky, since the probabilities of the appropriate mutations arising in the time required are
vanishingly small. This leaves three possibilities. The fi rst is that populations contain individuals that are
more tolerant and that these are selected as stress increases. The second is that a more tolerant population
stock recruits from areas (e.g. lower latitudes) that are historically warmer. The last is by swapping their algal
symbionts for other more tolerant varieties. This research program explores all three of these possibilities.
Inherent variability as a source of tolerant genotypes
Within any given population of corals, there will be differences among individuals with respect to genetic
make-up. As thermal stress increases, more heat tolerant individuals will be selected in favour of those that
are less heat tolerant. Conceivably then, the population would eventually become more heat tolerant even if
genetic variability had decreased. There are two necessary properties that need to be established before the
reality of this possibility can be established. The fi rst is inherent variability in thermal tolerance within coral
populations. The second is that selection acts to eliminate some but not all genotypes within a population.
There is little doubt that different individuals within a coral species have different tolerances. Edmunds
(1994) noted differences in bleaching sensitivity among individuals of Montastraea annularis during mass
bleaching events in the Caribbean. Similar differences across populations of corals within a single location
have been noted by Glynn, Brown and others (Glynn 1993; Brown 1997). Some of these differences are due
to the variation in secondary factors like light quality, which varies across and between colonies and can
strongly affect the susceptibility to bleaching (Jones et al. 1998; Mumby et al. 2001). Other studies have
shown differences may be due to different genotypes of Symbiodinium (Rowan et al. 1997). At present,
these studies are in their infancy. A demonstration that differences between corals are genetically based as
opposed to being phenotypic (because of acclimation) is lacking.
The demonstration of a strong role of selection across coral populations during mass bleaching events is
equally speculative at this point. While there is no fi rm data outlining the possibility of mass bleaching
events selecting more tolerant corals, two studies hint at the fact that this may have already occurred within
populations in the Eastern Pacifi c and Okinawa. Peter Glynn and co-workers have noted that the impact of
the 1997-98 event was smaller than the impact of the 1982-83 event, even though the size of the thermal
anomaly was suggested to be the same (Glynn et al. 2001). The authors suggest that the reason lies in the
1998 population having become tougher because of selection of more tolerant individuals in the earlier
event. While this is provocative, the data to say that the stress levels were identical is lacking. Most critically,
light was not considered in both cases. As Jones et al. (1998) have demonstrated in laboratory trials,
shading corals can dramatically reduce their tendency to bleach at a given temperature. The important
infl uence of light on the outcome of a given level of thermal stress was highlighted by Mumby et al. (2001).
In their study, much less bleaching occurred around Tahiti and Moorea in 1998 than expected from the
calculated exposure to temperature stress. Most notably cloud cover was unusually high in 1998 at these
locations, which most likely led to lower levels of stress.
15
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Immigration of warm adapted genotypes
If the variability required for adaptive change is not present within a reef, then the second possibility is that
it arises as part of the input from other reefs or reef systems. On the Great Barrier Reef, this might mean
that larvae from more northerly, warm-adapted reefs are transported southward to reef systems where
corals are being eliminated by thermal stress. In this way, there might be a southward movement of
genotypes to replace those that were fi nding southern locations too warm. There are two components that
are critical to whether or not this process is likely to occur or not. The fi rst is a healthy source of larvae.
The second is reef connectivity such that larvae can travel in substantial numbers between reefs.
Changes in climate are being felt on all coral reefs, irrespective of latitude (Hoegh-Guldberg 1999). This is
due to the fact that corals and their symbionts are adapted to local conditions and sea temperatures are
increasing across the planet. Consequently, there are no safe havens for corals. Given the impact of stress
on reproduction (see discussion above), the possibility of large numbers of gametes fl owing from warm-
adapted reefs to reefs where corals are being eliminated by thermal stress is unlikely.
Differences in the connectivity of reef systems and the life histories of corals have been shown to be crucial
for determining patterns of recovery or decline in Caribbean reef systems (Hughes et al. 2000).
Recent evidence that coral populations may be largely self-seeding, and connected at the scale of the
village, despite relatively high levels of genetic connectivity (Ayre and Hughes 2000) also challenges the
idea that reef systems may rapidly be repopulated after the removal of adult corals. While reefs may remain
connected genetically, the actual number of migrants that need to travel between reefs to maintain this
connectivity may be higher than the few individuals per generation. Given that recovery of reefs would
require large numbers of migrants arriving to rebuild coral populations, the demonstration of genetic
connectivity does not imply connectivity on the level to rapidly repopulate a reef.
Other pieces of information also appear to indicate that reefs may be more self-seeding than fi rst
appreciated. Hughes et al (2000) demonstrated that the fecundity of adult corals and the establishment of
larval recruits at a particular site are tightly correlated. In their study, the variation in space and time of the
fecundity of three common Acropora species explained most of the variation (72%) in Acroporid (staghorn
coral) recruitment. The dependence of recruitment on the size and health of the adult population also
suggests that the direct effects of temperature (or any anthropogenic factor) on the fecundity of corals will
have direct impacts on the abundance of new recruits and hence of adult reef-building corals.
Migration of warm-adapted genotypes of coral will occur as seas warm. The issues, as with other parts of
this discussion, are that the speed at which migration can occur may fall short of the rapid rate of change.
For example, warm-adapted coral species and genotypes may migrate to high latitudes but coral
communities may still decline because the rate of invasion and subsequent growth of migrants fail to match
the ever increasing level of thermal stress and mortality at any particular location.
Given the critical role that variability plays in determining rates of change within coral populations, assessing
genetic variability and tolerance at different sites was a priority of the project. The development of population
level genetic markers will also provide critical information on the interrelatedness of coral populations within
regions and hence insight into whether there is potential for the rapid genetic change within populations
that is required if adaptation is to keep pace with the rapid pace of current climate change.
Remaking the Holobiont (the Adaptive Bleaching Hypothesis)
It is highly likely that the properties that enable a coral to survive a given environmental circumstance will
involve both coral and Symbiodinium. Both partners contribute genetic potential to the overall capabilities
of the combination (or holobiont). Recent work has shown that Symbiodinium are highly diverse genetically,
with many species being represented on coral reefs. One potential way to improve fi tness would be to
swap one genetic variety of Symbiodinium for another with a view to adopting a more tolerant genetic
variety. Buddemeier and Fautin (1993) proposed that bleaching might be an adaptive behaviour that allows
reef-building corals and other symbiotic invertebrates to adopt new genetic characteristics as regards to
thermal tolerance. Although this idea continues to attract discussion (e.g. Baker 2001b versus Hoegh-
Guldberg 2002b), it has yet to be unambiguously demonstrated.
16
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
As with any valid argument, the assumptions of this proposal must all be true if the argument's logic is
sound. Ware (1996) formally state the assumptions of the Adaptive Bleaching Hypothesis (ABH). This has
been a useful exercise as it allows detailed scrutiny of the hypothesis and its assumptions. While some of
the assumptions underlying the ABH are true (e.g. Symbiodinium are genetically diverse), several critical
assumptions are not supported by available evidence. For example, the hypothesis critically requires that
"bleaching provides an opportunity for the host to be repopulated with a different type of partner".
To date, the invasion of a bleached host by a new species of Symbiodinium has not been reported.
While there is evidence that this has happened in geological time frames, the required observation that it
can operate on the time scale of a bleaching event has not been observed. Attempts to infect aposymbiotic
coral larvae (Weis et al. 2001) with the Symbiodinium of other coral hosts always resulted in ineffective
establishment of a new symbiosis compared to that of the native symbiont. Similar results have been
observed for other symbiotic hosts (Trench 1979).
The proponents of the hypothesis have now shifted emphasis to the potential that multicladal symbioses
(those that contain more than one type of Symbiodinium) that shift the ratio of different clades or types of
algae is proof of the Adaptive Bleaching Hypothesis. But as argued by Hoegh-Guldberg (1999), the
observation of a change in the proportion of pre-existing genotypes also does not qualify as "the host to
be repopulated with a different type of partner". Remixing may extend the thermal range of corals but it
will not result in the rapid shifts in the genetic potential of coral populations that are required if coral
populations are to keep up with climate change under even the mildest scenarios.
The ABH is a potential source of rapid genetic change in the composition of the holobiont. Given the
importance of this type of change in determining how coral and symbiont populations respond to climate
change, the BWG critically investigated whether or not there is evidence for this mechanism operating at
ecologically relevant timescales.
What will be the state of the world's coral reefs in 2050?
If there is not a strong case for evolutionary adaptation playing a role in modifying the thermal tolerances
of the reef-building corals that make up today's coral reefs, then under the scenarios, the only conclusion
is that reef-building corals will no longer dominate today's "coral" reefs by the middle of this century. In this
intervening period, reefs will have progressively lower amounts of reef-building corals. There are several
serious ramifi cations of coral reefs that are no longer dominated by reef-building corals. The fi rst is that
much of the productivity and nutrient dynamics of reefs and coastal waters is likely to change as corals
become rare. Secondly, because of the combined effects of thermal stress and increased carbon dioxide,
the calcifi cation on coral reefs is likely to be much reduced. This may lead to the net erosion of reefs among
other issues. The third is that the biodiversity of coral reefs will be substantially reduced. And the fourth is
that coral reef associated fi sheries are likely to change as waters warm and benthic habitats change.
Productivity, nutrient dynamics and benthic habitats
Coral reefs are regions of high productivity within otherwise low productivity waters of the tropics. While
some reefs prosper in turbid, high nutrient waters inshore, most coral reefs are located in low nutrient
waters. As stated at the outset, the highly evolved associations that typify coral reefs are central to their
success. Reef-building corals are the basis for the high levels of primary productivity of coral reef ecosystems.
Photosynthetic energy captured by the Symbiodinium of corals is released directly to the water column as
mucus or is consumed directly by fi lter-feeders, particle feeders and corallivores. Coral reefs also have
highly evolved nutrient dynamics, with most coral reefs acting as sinks for inorganic nutrients (Hatcher
1988,1990,1997). The net effect of these nutrient dynamics is that coral reefs often support primary
production values that may be as much as several hundred fold higher than those of surrounding tropical
oceans (Hatcher 1988).
17
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
While it is hard to generalise, reefs that lose reef-building coral cover undergo fundamental changes in the
types of organisms that dominate the substratum. Red coralline algae, macrophytes and cyanobacteria
tend to dominate reef substrates following the loss of reef-building corals. While little has been done so as
to understand how these new ecosystems function, primary productivity is almost certain to have varied
from the original coral dominated ecosystem. Surfaces also play a key role in the nutrient dynamics of coral
reefs and hence changes are likely within the nutrient dynamics of coral reefs. All of these changes are likely
to have implications for organisms living on coral reefs.
A potentially important link between these types of changes and other organisms that are likely to be
important to humans is the link between coral bleaching and the incidence of the fi sh toxin, ciguatera.
In French Polynesia, the benthic dinofl agellate, Gambierdiscus spp., is the primary causative agent when
people eat poisoned fi sh. Gambierdiscus produces a toxin that builds up in the tissues of fi sh that graze the
reefs where it lives. Chateau-Degat et al. (2005) studied the seasonal abundance and toxicity of
Gambierdiscus spp. on reefs around Tahiti and found peak densities of the dinofl agellate following a severe
bleaching event in 1994. The authors speculated that coral morbidity may be another critical factor in the
coral bleaching leading to blooms of Gambierdiscus spp. by providing "new surfaces" for colonization by
opportunistic species of macroalgae that are ideal hosts for Gambierdiscus spp. cells. The recent review of
ciguatera by Lehane and Lewis (2000) also concludes that the link between global climate change, mass
coral bleaching and incidences of ciguatera is strong and may explain the growing numbers of cases of
poisoning in the Pacifi c and elsewhere.
These types of changes could have major ramifi cations for the way that coastal ecosystems function and
may have major implications for such critical aspects as food and water quality. Trying to develop a better
understanding of these changes is central to the current project. The understanding of how coral abundance
will change under global warming is critical to any projection of how the goods and services of a coral reef
will change. This is important for understanding the socio-economic consequences of change within coral
reef ecosystems.
Calcifi cation
Calcifi cation is one of the most important processes occurring on coral reefs. Through the energy expensive
process of calcifi cation, calcium carbonate deposition has built reefs through time. The net effect is the
large areas of carbonate reefs that dot the world's oceans and the large deposits of calcium carbonate
(limestone) dating from previous periods of reef growth. Through this process, the physical structure of the
habitats in which thousands of species live has been created, and at a larger scale, coastlines are protected
by coral reef barriers.
Reef-building corals and other symbiotic organisms produce the large amounts of calcium carbonate rock
that are required to counter the signifi cant forces of erosion. A fairly well supported hypothesis is that the
dinofl agellate symbionts of these organisms produce the large amounts of energy needed to precipitate
calcium carbonate (Barnes and Chalker 1990). The addition of CO to seawater will lead to the formation
2
of carbonic acid and a decrease in the calcium carbonate saturation state. Gattuso et al (Gattuso et al.
1998) and Kleypas et al. (1999b) calculated the doubling of atmospheric concentrations of carbon dioxide
will lead to a 30% decrease in calcium carbonate saturation state (). As calcifi cation is directly dependent
on the available pools of ions for calcifi cation, these authors proposed that there would be a direct decrease
in calcifi cation. Since this work, several studies have shown unambiguously that calcifi cation is essentially
linearly dependent on (Marubini et al. 2001; Leclercq et al. 2002; Reynaud et al. 2003; Langdon and
Atkinson 2005; Kleypas and Langdon 2006).
As coral reefs represent a fi ne balance between calcifi cation and erosion, decreases of this magnitude are
potentially problematic and could result in the net erosion of existing coral reef matrices. Normal rates of
calcium carbonate deposition by corals range up to 20 cm per year (or its equivalent of 10 kg CaCO m-2
3
year-1). Rates of reef growth (which is essentially the balance between deposition and erosion) are about 1-2
cm year-1 (Done 1999). This implies that ~90% of the calcium carbonate deposited is removed by erosion.
Within this simple perspective, a decrease of 30% in deposition should place reef systems into net erosion
(by 20%). Recent works in the Great Barrier Reef (De'ath et al. 2009) and Thailand (Tanzil et al. 2009)
have revealed that coral reefs are calcifying at 15% lower rates today than they were three decades ago.
Most importantly, this degree of downturn in calcifi cation is unprecedented over the past four centuries.
18
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Introduction
Given the key roles that reefs play in providing habitat and
protecting coastlines, the implications of the net erosion of
coral reef structures is enormous. At this point in time, the
process and potential rates of erosion (through physical
and biological agents) is little understood. Clearly
illuminating on these processes and their relationship to
the rates at which calcium carbonate is likely to be
deposited in the future should be a priority for research.
Consequently, the targeted research group on coral
bleaching is exploring the impact of thermal stress and
decreasing alkalinity to gain a better perspective on how
changing conditions will affect the fundamental processes
of reef accretion and erosion. These studies have been Figure 3. The Orange-spotted File fi sh (Oxymonacanthus
extended in the fi eld to investigate how changes to the longirostris) largely disappeared from Okinawan reefs
after the collapse of coral populations during the 1998
abundance of reef-building corals under a variety of reef mass bleaching event (Kokita and Nakazono 2001).
systems affect the net balance of calcium carbonate on Some fi sh stocks appear relatively unaffected by the
coral reef erosion.
loss of coral communities; others (probably obligate
corallovores like O. longirostris) show rapid responses
Biodiversity
to the loss of coral stocks. Photo: O. Hoegh-Guldberg
The impact of the reduced coral abundance on biodiversity is still in its infancy. Even the mildest climate
change scenarios project substantial decreases in the amount of coral cover and consequently coral
associations. Community changes like those seen by Loya et al. (2001) in Okinawa may be commonplace
within the next few decades. How these changes will affect the thousands of other organisms on coral reefs
is still being examined. Organisms that depend on corals for food or shelter and which reproduce via
external fertilization might be predicted to face extinction as their primary habitat, corals, become extinct.
The response of fi sh communities over the short term has yielded some surprises. In the Seychelles, for
example, Spalding and Jarvis (2002) found that the overall structure of fi sh communities had changed very
little despite massive decreases (3-20 fold) in living coral cover after the 1997-98 bleaching event. Counter
to this is the observation of rapid decreases in the abundance of species that are obligate corallivores.
The Orange-spotted fi lefi sh (Oxymonacanthus longirostris, Figure 3), a coral obligate, rapidly disappeared
from Okinawan reefs after the 1998 bleaching event (Kokita and Nakazono 2001). Abundances of some fi sh
also appear to increase following the loss of reef-building corals from reef communities. Lindahl et al
(2001), for example, showed an overall increase in fi sh abundance after the 1998 mass bleaching event on
Tanzanian reef systems. This was largely linked to an increase in herbivores. Similar conclusions have been
seen in studies at other sites (Chabanet 2002). Recent reviews showed that coral-bleaching events lead to
unequivocal reductions in fi sh densities and diversity, which lagged behind the thermal event by up to 2-3
years (Munday 2004; Wilson et al. 2006; Munday et al. 2007; Pratchett et al. 2008).
Other organisms are also likely to respond to changes in coral cover. For example, over 55 species of
decapod crustacean are associated with living colonies of a single coral species, Pocillopora damicornis
(Abele and Patton 1976; Black and Prince 1983). Nine of these are known to be obligate symbionts of living
pocilloporid coral colonies. Branching corals of the genus Acropora, for example, have at least 20 species
of obligates symbionts that depend solely on Acropora to provide habitat. It is important to point out that
the spacing of corals on a habitat may be critical for the reproductive success of coral associates that
require sexual reproduction to proceed to the next generation. As corals become rare (i.e. spaced farther
and farther apart), these organisms may be threatened as the chance of fi nding a partner or attaining
successful fertilization becomes smaller. While the pathway and time course of this change is undefi ned,
few experts are suggesting that biodiversity will be unaffected by a rapid loss of reef-building corals from
the system. Our understanding of the impacts of climate change on biodiversity, however, is in its infancy
and is a high priority of studies to be undertaken within the BWG projects.
19
Research
directions
Photo: D. Thornhill
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research directions
As outlined in the Introduction, there are many gaps in our understanding of coral reefs and change. In the
design stage of the BWG workplan, a number of research priorities for management and policy development
were identifi ed. Given the funding, expertise and research priority, the BWG identifi ed a number of key
research themes on which it focused during the initial fi ve-year period. It was very clear from the start that
it would be impossible to tackle all questions at all sites where reefs are in decline. In keeping with the
major part of its theme mass coral bleaching the major focus of the BWG research program was climate
change, coral bleaching and its interaction with local ecological factors. In this regard, the BWG was set to
contribute heavily to four major themes. These themes formed a major research focus, along with studies
that explored their relationship to each other, and the need for a better understanding of the likely changes
as the climate warms and carbonate in our oceans declines. This led to consideration of a number of
strategies that we must implement as a society to counter the real impacts on coastal human society.
Programs
Coral-symbiont
responses to
thermal stress
Organismal
How fast and
What is
Biomarkers
mechanisms to
where is change
changing?
of stress
ecological outcomes
occurring?
Projections of
change and
socio-economic impact
Adaptive responses
In the original BWG research plan, 13 projects were identifi ed. These projects brought together several of
the BWG members along with their postdoctoral fellows and postgraduate students and were completed
by the middle of year fi ve of the project. As these projects were pursued, several were merged to form ten
fi nal projects. An overview of the activity, successes and products from each of these research projects are
described in the section entitled scientifi c outcomes. In other sections, research training, conference
presentations and workshop activities are also described.
21
Member
biographies
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Member biographies
Ove Hoegh-Guldberg
(University of Queensland, Australia; CHAIR)
Ove Hoegh-Guldberg is Professor and Director of the Centre for Marine
Studies at the University of Queensland. He completed his BSc. Hons at the
University of Sydney and PhD at UCLA in 1989, and was recognized in 1999
with the Eureka prize for Scientifi c Research into the physiological
mechanisms of coral bleaching. Specialising in the impact of climate change
on biological systems, Professor Hoegh-Guldberg has worked in polar,
temperate and tropical regions, particularly on the impacts of ocean
warming and acidifi cation on coral reefs. He has produced over 160 peer-
reviewed publications and has mentored over 30 postgraduate students.
Professor Hoegh-Guldberg is currently a Queensland Smart State Premier's
Fellow, works closely with several industry and NGO groups on climate
change related issues, and is a reviewing editor at Science Magazine. In
mid 2009, he became Director of the Global Change Institute at the
University of Queensland. Details of his laboratory group can be found at:
www.coralreefecosystems.org.
Yossi Loya
(Tel Aviv University, Israel; CO-CHAIR)
Yossi Loya is a Professor at the Department of Zoology, Tel Aviv University,
Israel and incumbent of the Raynor Chair for Environmental Conservation
Research. He completed his PhD at the Department of Ecology and
Evolution, State University of New York at Stony Brook in 1971. He has
published over 200 papers on a wide range of coral reef subjects including
Ecology and Evolution, Biodiversity; Conservation and Management;
Theoretical Ecology; Competitive networks; Marine pollution; Coral
diseases; Reproductive strategies of corals, and Global climate changes
and their effects on reef corals. In recognition for his signifi cant contribution
to coral reef science he was awarded the quadrennial Darwin Medal by the
International Coral Reef Society in 2000. Yossi has been the mentor of 25
PhD and 45 MSc students comprising today the backbone of coral reef
researchers in Israel. Most recently (2009) he has been elected as the fi rst
member in the fi eld of Ecology to the Israeli Academy of Sciences.
John Bythell
(University of Newcastle, United Kingdom)
John Bythell's PhD research was based at the West Indies Laboratory (WIL),
St. Croix from 1985-88 working on a nitrogen and carbon budget for
Acropora palmata. He then took up a lectureship at WIL and stayed on at
St. Croix up to 1991. He was involved in establishing the coral reef monitoring
programme at Buck Island on St Croix, run by the National Park Service since
it was established in 1988. Since 1991 he has been at Newcastle, which
houses a centre for tropical research and teaching. He was director of the
Master's degree programme in Tropical Coastal Management from 1999-
2003, which has some 200 graduates working in coastal management
worldwide. His research spans community-level dynamics to cellular and
molecular stress responses in corals and related organisms. Recent work has
focussed on culture-independent analysis of bacterial communities
associated with corals and investigating the structure and function of the
23
coral surface mucus layer that protects the coral from pathogen invasion.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Member biographies
William Fitt
(University of Georgia, Athens, USA)
William Fitt is a Professor of Ecology and Marine Science at the University
of Geórgia. He did his PhD at the University of California at Santa Bárbara
on how zooxanthellae get into their hosts, and several postdocs, including
one on giant clams and another on the jellyfi sh Cassiopea. He works
primarily in the Western Atlantic doing research at several sites and
monitoring the health of coral reefs. In the past fi ve years Dr Fitt has worked
with postdoctoral student and now Assistant Professor Todd LaJuenesse
and students Dusty Kemp (the role of different clades of zooxanthellae in
the same species of coral), Jennifer McCabe Reynolds (photo-protection of
zooxanthellae), and Tom Shannon (symbionts in fl atworms).
Ruth Gates
(University of Hawaii, USA)
Ruth D. Gates is an Associate Research Professor at the Hawaii Institute of
Marine Biology (HIMB), a research unit embedded within the School of Earth
and Science and Technology at the University of Hawaii, Manoa. HIMB
combines close proximity to a living reef with the capacity to support a full
range of research activities that span fi eld operations to functional genomics.
Her research focuses on the mechanisms by which reef corals sense and
respond to changes in the marine environment, and spans a range of scales
from ecological to molecular. Within this context, her current research is
aimed at understanding how the biological complexity added by the
intimate associations between corals and a diverse range of other organisms
map onto the environmental resilience of corals. This research is implemented
in the context of a dynamic training program involving undergraduates,
graduate students, postdoctoral scholars and junior faculty members.
Roberto Iglesias-Prieto
(Universidad Nacional Autónoma de México)
Roberto Iglesias-Prieto obtained his PhD at the University of California,
Santa Barbara. After two years of postdoctoral training at UCSB, he
accepted a position as a senior research scientist at the Center for Scientifi c
Research and Higher Education of Ensenada in northwest Pacifi c coast of
Mexico. Since 1996 Roberto moved to the Puerto Morelos Academic Unit
of the Institute of Marine Science and Limnology of the Universidad
Nacional Autónoma de México, where he is a full research professor and
chair of the Academic Unit and of the Centre of Excellence of Mesoamerica
within the CRTR Program. Roberto's research interests range from the basic
photobiology of corals to the ecological and evolutionary consequences of
specifi city in algal-invertebrate symbioses. When Roberto is not studying
the responses of algal-invertebrate sea monsters to climate change, he
enjoys sailing and playing traditional Mexican music.
24
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Member biographies
Michael Lesser
(University of New Hampshire, USA)
Michael P. Lesser is a Research Professor at the University of New Hampshire
where he also obtained his BSc and MSc degrees. He earned his PhD. at
the University of Maine working on the effects of ultraviolet radiation on
marine organisms, and then was a postdoctoral fellow at the Bigelow
Laboratory for Ocean Sciences. He has worked extensively in the area of
ultraviolet photobiology in the Antarctic, Gulf of Maine, and tropical coral
reefs around the world as well as the physiological ecology of marine
invertebrates in temperate subtidal and intertidal systems. Dr. Lesser has
spent most of his research career studying oxidative stress in marine
organisms and in particular he has studied extensively the role of oxidative
stress in the coral-bleaching phenomenon. His current research focuses on
the physiology and ecology of sponges and corals in the mesophotic zone
(30-150 m) of coral reefs.
Tim McClanahan
(Wildlife Conservation Society, Kenya)
Tim McClanahan is a Senior Conservation Zoologist at the Wildlife Conservation
Society, where he has worked for the past 17 years. He works on the ecology,
fi sheries, climate change, social-ecological systems, and management of coral
reefs and also enjoys interdisciplinary research with a view to solving broader
conservation and science issues. During the past 25 years his research has
evolved from a focus on prioritizing the effects of human disturbance on coral
reefs, the role of marine protected areas, developing theoretical and simulation
models of coral reefs, practical means to restore degraded reefs through
manipulation of the food web and management, and understanding human
organization around resources and management. Most recently he has been
investigating the interaction between climate change, coral reef management
and human adaptive capacity.
Robert van Woesik
(Florida Institute of Technology, USA)
Robert van Woesik is a professor in the Department of Biological Sciences at
the Florida Institute of Technology. He did his PhD at the James Cook
University, Australia. His research interests are broad but ultimately linked to
population ecology of scleractinian corals. Research includes the spatial and
temporal assessment of coral assemblages and the application of that
ecology to the management of coral reefs. Robert's approach is often multi-
disciplinary utilizing a combination of empirical and mathematical techniques.
He is interested in understanding vital rates and key processes that underlie
and drive state variables on coral reefs. Most recently, he has become
interested in ecological questions related to thermal stress, coral bleaching
and predictive modelling of coral population trajectories under different
climate change scenarios.
25
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Member biographies
Christian Wild
(University of Munich, Germany)
Christian Wild received his PhD in 2003 from Max-Planck Institute for Marine
Microbiology in Bremen, Germany. He then worked as the focal point for
coral reef issues at IOC-UNESCO in Paris, France. Since 2006, he leads the
junior research group Coral Reef Ecology (CORE) at the University of
Munich, Germany. His group investigates biogeochemical processes and
ecological functioning in coral reef ecosystems in the light of environmental
change. A special focus thereby is put on understanding the role of
hermatypic corals as reef ecosystem engineers in comparison to other key
organisms, in particular reef algae. Research in the last 5 years was mainly
carried out at the Mexican and Australian CoEs along with seasonal studies
in the Northern Red Sea.
Lianne Cook
(University of Queensland, Australia; Administrator)
Lianne has more than 20 years administration and project management
experience, having been an Army Offi cer both in Australia and overseas.
During that time she wrote and delivered training packages at the Army
Training Centre in Bandiana, worked as a consultant with the British Army in
Germany, designed warehousing projects and administered a Logistics
Group of more than 700 staff. She has also worked for not-for-profi t
organisations working with youth and children at risk. She is an accredited
and practicing Life Coach and has worked as a consultant for Government,
charity organisations and private enterprise including Boeing Australia.
Her interests include photography and art, and she has won several prizes
for her poetry and has held several photography exhibitions as well as
producing a calendar and book. She is now the Research Manager for the
Hoegh-Guldberg lab at Centre for Marine Studies, UQ.
26
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Member biographies
Past members (2004-2008)
David Obura
(CORDIO-East Africa; Kenya)
David Obura is the coordinator for the Coral Reef Degradation in the Indian
Ocean (CORDIO) East Africa, supporting activities in mainland Africa and
the island states, including research, monitoring and capacity building of
coral reefs and coastal ecosystems. A primary focus is the implications of
global and local threats to coral reef health and their long term prospects
and provision of socio-economic benefi ts. He received a PhD from the
University of Miami in 1995 on coral bleaching and life history strategies,
which has developed into a primary research interest in climate change,
coral bleaching and resilience of coral reefs. Other areas of work include the
development of participatory monitoring and research tools with artisanal
fi shers in East Africa, and remote-reef surveys such as in the Phoenix Islands,
central Pacifi c, and in the central and western Indian Ocean.
Ron Johnstone
(University of Queensland, Australia)
Ron Johnstone is an Asssociate Professor who currently heads a research
team engaged in coastal ecosystem function, sustainability and management
projects for the University of Queensland. He has a long professional history
in coastal nutrient and ecosystem function research and a longstanding
international reputation, having worked in over 13 countries. Current work
on the expanded emergence of toxic algal blooms and the functional
ecosystem outcomes on coral death all focus on adaptation to climate
change and the ecosystem elements underpinning this.
27
Glossary
ABH: Adaptive Bleaching Hypothesis
BWG: the Bleaching Working Group
CRTR: Coral Reef Targeted Research & Capacity Building for Management
CoE: Centre of Excellence
DHM: Degree Heating Months
ENSO: El Niño Southern Oscillation
EST: Expression Sequence Tags
GBIF: Global Biodiversity Information Facility
GCRMN: the Global Coral Reef Monitoring Network
GEF: the Global Environment Facility
IOC-UNESCO: Intergovernmental Oceanographic Commission
IUCN: the International Union for Conservation of Nature
SST: Sea Surface Temperatures
UNEP: United Nations Environment Programme
WIO: The Western Indian Ocean
28
Photo: A. Zvuloni
Scientifi c
outcomes
As outlined above, reef-building coral and their symbionts are
critical to coral reefs as the principal frame-builders and habitat
forming organisms of these vast ecosystems. They are also among
the organisms most affected by climate change. Several gaps in our
knowledge limit our understanding of the likely changes facing coral
reefs, and whether or not corals and their symbionts will adapt to
climate change. Consequently, 10 projects listed on the following
pages were undertaken to improve our understanding of these
key aspects. This number does not include the many MSc and PhD
projects that were associated with the Project.
29
Photo: A. Zvuloni
1
Theme 1
Coral-symbiont responses
to thermal stress
Understanding the responses of corals and their symbionts to
thermal stress lies at the heart of understanding the differences
between corals in terms of their sensitivity to climate change,
as well as opening the door to particular management
strategies that aim to protect more resilient coral communities
as part of the response to climate change. Six projects were
developed which sought to rapidly improve our understanding
of this important area.
30
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Project 1. Resolving the Adaptive Bleaching Hypothesis
1
The Adaptive Bleaching Hypothesis (Buddemeier and Fautin 1993) proposes that corals have the ability to
rapidly evolve tolerance to changes in ocean temperature that are likely by the end of the current century.
This has split the professional opinion into two camps. Those researchers who support this idea (e.g Baker
2001b; Little et al. 2004; Rowan 2004) propose that bleaching promotes a rapid exchange of dinofl agellate
symbionts such that corals will rapidly evolve greater tolerance to climate change driven impacts on ocean
temperature. In this regard, the Adaptive Bleaching Hypothesis (ABH) holds that "evolutionary switching"
occurs within ecological time frames which may enable corals to swap their symbionts for more heat tolerant
ones. The other research groups (e.g. Hoegh-Guldberg 2002b; Goulet and Coffroth 2003; Goulet 2006;
Goulet 2007) have concluded that the symbiosis between reef-building corals and dinofl agellate symbionts
is not fl exible to any real extent in ecological time, and that bleaching does not allow the rapid evolution
of thermal tolerance.
This project had three main components. The fi rst was the
production of a critical review regarding the state of
understanding and an evaluation of the evidence for and
against the ABH. This was published in the journal
Perspectives in Plant Ecology, Evolution and Systematics
(Stat et al. 2008 ). The second was a workshop which was
held in May 2005 at the Centre of Excellence (CoE) at
Puerto Morelos. The workshop included researchers from
both camps, representing all points of view. The major
outcome of this workshop was a consensus statement on
the issues associated with the ABH, which was agreed to
by the 58 discussants at the Puerto Morelos meeting in
May 2005. This consensus statement appears below.
The third was a series of studies aimed at exploring the
Photo: D. Obura
fl exibility of host-Symbiodinium combinations in different
environments. In the latter case, reciprocal transplant
studies from one environment to another were explored in
terms of whether or not these combinations could change
over time.
Two signifi cant studies were undertaken during the project,
both demonstrating that coral-Symbiodinium combinations
were not fl exible when transferred between environments
(Iglesias-Prieto et al. 2004; Sampayo et al. 2007). This and
the high degree of fi delity observed between coral hosts
and particular genotypes of Symbiodinium (Project 3)
indicate that the symbiosis is relatively infl exible in the
short time frames associated with ecological changes such
as mass coral bleaching. This suggests that the Adaptive
Photo: T. McClanahan
Bleaching Hypothesis is incorrect.
Key literature generated with full/partial project support:
1.
Stat M, Carter D, Hoegh-Guldberg O (2006) The evolutionary history of Symbiodinium and scleractinian hosts-symbiosis, diversity, and the effect of climate change.
Perspectives in Plant Ecology, Evolution and Systematics 8:23-43
2.
Hoegh-Guldberg O (2009) Climate change and coral reefs: Trojan horse or false prophecy? A response to Maynard et al. (2008). Coral Reefs, in press
31
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Consensus statement on the current understanding of the diversity, specifi city,
and fl exibility of Symbiodinium symbioses
1
Statement agreed to by participants at Puerto Morelos meeting (May 17 2005)
Dinofl agellates in the genus Symbiodinium are the principal symbionts of reef-building corals as well as
hosts from several other phyla. These single-celled photosynthetic organisms generally occur intracellularly
within host cells. Once thought to represent a single species, Symbiodinium microadriaticum, they are now
considered phylogenetically diverse and include a number of described species.
Corals and their dinofl agellate symbionts exhibit a range of specifi cities. Some coral species transfer
symbionts directly between generations, while others acquire symbionts from the environment anew at
each generation. In the latter case, the events that lead to the establishment of Symbiodinium symbioses
are relatively specifi c despite the fact most genotypes can be taken up by host cells initially.
The initial types of Symbiodinium that enter newly settled corals appear to be a subset of those available
in the environment. This set of Symbiodinium types is further narrowed down to the complement dominant
within the adult host and its environment, although some types may persist at background levels within the
tissues of the host coral.
The processes by which one or several symbionts become dominant within the host have yet to be
described, but probably involve host-symbiont recognition, specifi c host factors and competition between
Symbiodinium genotypes. Future studies need to focus on understanding these mechanisms and their
relative importance.
Adult corals may change their symbiotic complement in response to environmental change. `Shuffl ing' and
`switching' are two non-exclusive mechanisms by which this may be accomplished. `Shuffl ing' is a
quantitative (compositional) change in the relative abundance of symbionts within a colony; `switching' is
qualitative change involving symbionts acquired from the environment. These exogenous symbionts may
represent types that are new to the colony but not the species, or may be truly novel to the host species
which is referred to as `evolutionary switching.'
While evolutionary switching is assumed to explain the phylogenetic patterns of symbiont distribution
within hosts, such events are thought to be very rare. Shuffl ing and/or switching of existing symbionts are
thought to be more common. However, distinguishing between evolutionary (and truly novel) switches,
and those that involve existing symbionts, is a methodological challenge.
Some corals routinely shuffl e symbionts as a consequence of seasonal regulation of symbiont numbers with
or without visual signs of bleaching. Corals can also shuffl e symbionts during and after bleaching. Switching
is also likely to be promoted by seasonal regulation and bleaching. Both shuffl ing and switching may be
important mechanisms that extend the ability of corals to acclimatise to changes in the environment but
requires further investigation to demonstrate true physiological advantages of the change involved.
Bleaching probably did not evolve directly as a mechanism for shuffl ing or switching symbionts, and has
clear pathological effects. A potential side effect of bleaching is an acceleration of symbiotic change, which
has the potential to elevate the tolerance threshold of
coral reefs to environmental change. However, without
evolutionary switching, there will be no change in the
tolerance threshold for any particular coral-Symbiodinium
symbiosis.
Widespread concern persists within the research
community over the future of coral reef ecosystems.
Increasing temperatures as well as ocean acidifi cation and
other anthropogenic challenges continue to pose grave
threats to the future of these ecosystems and the people
who depend on them. Unless these threats are addressed
as a priority soon, coral reefs will continue to degrade.
This project and the publications stemming from it has
concluded that rapid changes to the thermal sensitivity
from the symbionts `shuffl ing' are limited, and that evidence Figure 4. Scott Santos addresses the BWG workshop on
of novel symbioses forming (and changing the thermal "Diversity, fl exibility, stability, physiology of Symbiodinium,
threshold of corals) at ecological timescales is nonexistent.
and the associated ecological ramifi cations."
32
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
List of participants at the Puerto Morelos meeting
Name
Affi liation
Email
1
Ateweberhan, Mebrahtu
World Conservation Society, Kenya
tmcclanahan@wcs.org
Azam, Farooq
University of California, San Diego, USA
fazam@ucsd.edu
Bahgooli, Ranjeet
UAPM, ICML, UNAM, Mexico
coral@scientist.com
Bailey, Merideth
University of New Hampshire, USA
mab26@cisunix.unh.edu
Baker, Andrew
Columbia Unviversity, USA
abaker@wcs.org
Banaszak, Ania
UAPM, ICML, UNAM, Mexico
banaszak@mar.icmyl.unam.mx
Baraka, Rugura
Interuniversity Institute of Marine Science, Tanzania
barakakuguru@hotmail.com
Bythell, John
University of Newcastle, UK
J.C.Bythell@newcastle.ac.uk
Coffroth, Mary Alice
University of Buffl o, USA
coffroth@buffalo.edu
Dani Chernov
Tel Aviv University, Israel
yosiloya@post.tau.ac.il
Davy, Mark
University of Queensland, Australia
mdavey@marine.uq.edu.au
De Sampayo, Eugenia
University of Queensland, Australia
E. Sampayo@marine.uq.edu.au
Deckenback, Jeffry
University of Queensland, Australia
JeffryD@marine.uq.edu.au
Díaz Ruíz, Ayax Rolando
University of Queensland, Australia
A.Diaz-Ruiz@marine.uq.edu.au
Dove, Sophie
University of Queensland, Australia
sophie@uq.edu.au
Enríquez, Susana
UAPM, ICML, UNAM, Mexico
enriquez@icmyl.unam.mx
Falcon, Luisa
UNAM, Mexico
falcon@miranda.ecologia.unam.mx
Fitt, William K
University of Georgia, USA
fi tt@sparrow.ecology.uga.edu
Gates, Ruth
University of Hawaii, USA
rgates@hawaii.edu
Gilner, Jessica
Florida Institute of Technology, USA
jgilner@fi t.edu
Gruppy, Reia
University of Newcastle, UK
reia.guppy@ncl.ac.uk
Harvell, Drew
Cornell University, USA
cdh5@cornell.edu
Hernandez Pech, Xavier
UAPM, ICML, UNAM, Mexico
iglesias@mar.icmyl.unam.mx
Hill, Ross
University of Technology, Sydney, Australia
Ross.Hill@uts.edu.au
Hoegh-Guldberg, Ove
University of Queensland, Australia
oveh@uq.edu.au
Holmes, Glenn
University of Queensland, Australia
rnje@uq.edu.au
Iglesias-Prieto, Roberto
UAPM, ICML, UNAM, Mexico
iglesias@mar.icmyl.unam.mx
Jatkar, Amita
University of Newcastle, UK
a.a.jatkar@ncl.ac.uk
Johnstone, Ron
University of Queensland, Australia
rnjeuq.edu.au
Jordan, Eric
UAPM, ICML, UNAM, Mexico
jordan@mar.icmyl.unam.mx
Kaniewska, Paulina
University of Queensland, Australia
p.kaniewska@marine.uq.edu.au
Kemp, Dusty
University of Georgia, USA
fi tt@sparrow.ecology.uga.edu
Kinzie, Robert III
University of Hawaii, USA
kinzie@hawaii.edu
Kuhl, Michel
University of Copenhagen, Denmark
MKuhl@bi.ku.dk
LaJuenesse, Todd
Florida International University, USA
lajeunes@fi u.edu
Leggat, Bill
University of Queensland, Australia Australuia
bleggat@marine.uq.edu.au
Lesser, Michael
University of New Hampshire, USA
mpl@cisunix.unh.edu
Loya, Yossi
Tel Aviv University, Israel
yosiloya@post.tau.ac.il
Manning, McKenzie
University of Hawaii, USA
rgates@hawaii.edu
Matz, Michael
University of Florida, USA
matz@whitney.ufl .edu
Méndez, Eugenio R.
CICESE, Ensenada, Mexico
emendez@cicese.mx
Miller, David
James Cook University, Australia
David. Miller@jcu.edu.au
Ortiz, Juan Carlos
University of Qeensland, Australia
jortiz@marine.uq.edu.au
Padilla-Gamino, Jackie
University of Hawaii, USA
rgates@hawaii.edu
Pantos, Olga
San Diego State University, USA
opantos@sciences.sdsu.edu
33
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
List of participants at the Puerto Morelos meeting continued
Name
Affi liation
Email
1
Ralph, Peter
University of Technology, Sydney, Australia
Peter.Ralph@uts.edu.au
Reyes, Hector
Universidad Autónoma de Baja California Sur, Mexico
hreyes@uabcs.mx
Raymundo, Laura
University of Guam, Philippines
lauriejr@dgte.mozcom.com
Rodriguez-Lanetty, Mauricio
Oregon State University, USA
rodrigm@science.oregonstate.edu
Rodriguez Roman, Aime
UAPM, ICML, UNAM, Mexico
aime@mar.icmyl.unam.mx
Roff, Jez
University of Queesnland, Australia
s4015960@student.uq.edu.au
Romanski, Adrienne
Columbia University, USA
Amr2007@columbia.edu
Rosenberg, Eugene
Tel Aviv University, Israel
eros@post.tau.ac.il
Santos, Scott
University of Arizona, USA
srsantos@email.arizona.edu
Segal, Roee
Tel Aviv University, Israel
yosiloya@post.tau.ac.il
Shenkar, Noa
Tel Aviv University, Israel
yosiloya@post.tau.ac.il
Schwarz, Jodi
DOE Joint Genome Institute, USA
JASchwarz@lbl.gov
Smith, Garriet
University of South Carolina, USA
smithres@aiken.sc.edu
Ulstrup, Karen
University of Technology, Sydney, Australia
kulstrup@gmail.com
van Oppen, Madeleine
James Cook University, Australia
m.vanoppen@aims.gov.au
van Woesik, Robert
Florida Institute of Technology, USA
rwv@fi t.edu
Visram, Shakil
Bamburi, Mombasa, Kenya
shak@africaonline.co.ke
Ware, John
SeaServices, Gaithersburg, USA
jware@erols.com
Warner, Mark
Univerity of Delaware, USA
mwarner@udel.edu
Wegley, Linda
San Diego State University, USA
opantos@sciences.sdsu.edu
Weil, Ernesto
University of Puerto Rico, PR
eweil@caribe.net
Willis, Bette
James Cook University, Australia
Bette. Willis@jcu.edu.au
Winters, Gidon
Tel Aviv University, Israel
wintersgidon@hotmail.com
Yellowlees, David
James Cook University, Australia
david.yellowlees@jcu.edu.au
Zvuloni, Assaf
Tel Aviv University, Israel
zvolonia@post.tau.ac.il
34
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Project 2. Understanding the fundamental mechanisms
of coral bleaching
1
Erika Díaz-Almeyda, Florencia Colombo, Sophie Dove, Susana Enríquez, Paul Fisher, William K. Fitt, Luis
González-Guerrero, Xavier Hernández-Pech, Ove Hoegh-Guldberg, Roberto Iglesias-Prieto, Dusty Kemp,
Michael P. Lesser, Robin Smith, and Patricia Thomé.
Location: Australasian CoE and Mesoamerican CoE
Key results
In this project we explored the early responses to thermal
stress by the symbiotic algae and the coral host. This led to
a major breakthrough in terms of our understanding of
how light is amplifi ed by scattering within coral skeletons
that are undergoing mass bleaching. This also led to a
physiological model that is onset with a relatively mild
imbalance in the rate of energy capture by the algae, and
the rate of utilization of this energy. The initial compensatory
photoprotective mechanisms fail to protect as the host
skeleton increases the internal light fi elds leading to the
collapse of the symbiotic association. This phenomenon
leads to the propagation of oxidative stress in the animal
host resulting in increasing levels of DNA damage and
eventually in cell death. The results of this model helped
explain the sharp tipping point observed for coral Figure 5. Bleached (left hand side) versus normal
(right hand side) Acropora near Great Keppel Island,
bleaching, as well as why corals differ in their thermal Southern Great Barrier Reef in January 2006.
tolerance and sensitivity to coral bleaching.
Photo: O. Hoegh-Guldberg
Background
Coral bleaching can be defi ned as the disassociation of the symbioses between marine invertebrates and
symbiotic dinofl agellates. This phenomenon manifests itself as a loss of coral pigmentation, resulting from
reductions in symbiont densities and/or cellular photosynthetic pigment concentrations (Figure 5). While
coral bleaching can be elicited as a response to several environmental insults, most massive bleaching
events have been associated with the prolonged presence of sea surface temperatures (SST) above the
regional long-term summer average (Thompson and van Woesik 2009a; Thompson and van Woesik 2009b).
The observed increases in frequency and severity of coral bleaching events during the last couple of
decades is a direct result of global climate change and therefore is considered a major threat for the future
of coral reefs. Despite its obvious importance, our understanding of the molecular and cellular mechanisms
responsible for coral bleaching is far from complete (van Oppen and Gates 2006). Some areas of research
such as the study of early effects of thermal stress on the photosynthetic responses of symbiotic
dinofl agellates and the subsequent propagation of damage by the formation of free radicals are relatively
well documented (Lesser 2006; Fitt et al. 2009), while others, such as the mechanisms behind the loss of
symbiotic dinofl agellates from host tissues are less clearly understood.
Coral bleaching is a complex phenomenon that involves the responses of at least two organisms with
different evolutionary histories. This phenomenon is initiated after a stressful stimulus is perceived by one or
the two members of the symbioses and propagates through the intact symbiotic association (holobiont)
after many interconnecting steps, probably following different pathways, all of which terminate with the
breakdown of the symbioses, and in some extreme cases results in massive coral mortality (Muller et al.
2008). In this project we explored the mechanistic basis behind the propagation of thermal stress of relatively
small amplitude, into signifi cant light and oxidative stressful conditions in the holobiont. We place particular
emphasis on the role played by solar radiation in the reception and magnifi cation of the stress generated by
exposure to elevated temperatures. The description of cellular and molecular events connecting stressful
conditions with the disassociation of the symbiosis is a prerequisite for the development of models capable
of predicting the possible ecological responses of these organisms under future climatic scenarios.
35
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Methods
Throughout the project we employed an extensive suite of methodological approaches that allowed us to:
1
a. Defi ne the optical properties of coral skeletons.
b.
Provide a functional defi nition of the bleaching phenotype.
c.
Characterise possible sites of damage for thermal stress.
d.
Identify the physiological and biochemical signaling pathways linking the initiation of thermal stress
in both members of the symbiosis, and the induction of the characteristic loss of pigmentation.
We used state-of-the-art spectroscopic techniques, in conjunction with classical methods for the
determination of the basic biometric descriptors of coral physiology to describe the optical properties of
intact coral surfaces with different densities of photosynthetic pigments. In addition, we evaluated the
effect of the presence of different algal symbionts on the responses of the holobiont to thermal stress,
using molecular techniques that allowed us to identify different Symbiodinium types at a level equivalent
to species.
The identifi cation of possible targets for thermal stress in Symbiodinium required the use of various types
of techniques based on analyses of the chlorophyll a (Chl a) fl uorescence signals, in combination with
numerous biochemical techniques such as different chromatographic analyses of pigments and lipids, and
the use of several different inhibitors of specifi c cell functions.
The preliminary description of the signaling pathways involved in coral bleaching required the use of
multiple biochemical and physiological approaches to detect responses. These ranged from changes in the
patterns of abundance of several key enzymes involved in scavenging radical oxygen species; expression
of all chromophore proteins; light harvesting complexes; to spectroscopic techniques to evaluate the role
of multiple scattering by different coral skeletons in the amplifi cation of the internal light fi elds.
In collaboration with several members of the Remote Sensing Working Group, we are currently developing
a model to predict the intensity of coral bleaching at large geographical areas based on satellite
determinations of SST and solar radiation in conjunction with an explicit physiological model of coral
bleaching. This product has the potential of increasing the sensitivity of the current bleaching predictions
based only on sea surface temperature.
36
Photo: O. Hoegh-Guldberg.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Results and discussion
This project has achieved its research goals and has signifi cantly advanced our understanding of the
1
fundamental mechanisms underpinning coral bleaching.
a. Functional defi nition of coral bleaching
In the absence of acute thermal stress, reef corals respond to seasonal variations in temperature and solar
radiation adjusting their physiology and biochemistry in a process that is very similar to the photoacclimation
observed in corals growing in a vertical depth gradient. In summer chlorophyll a (Chl a) densities are
signifi cantly lower than in winter. Although corals look pale to the naked eye they are perfectly functional
(Figure 6); actually, maximum growth rates are achieved under these circumstances (Fitt et al. in press).
Analyses of the optical properties of intact corals revealed a non-linear variation of coral absorptance (% of
incoming light absorbed by the tissue) as a function of coral pigment density (Enríquez et al. 2005;
Rodríguez-Román et al. 2006). Corals can reduce up to 70 percent of their Chl a density in summer with
only a minor change in their apparent coloration (Anthony et al. 2007; Apprill and Gates 2007; Fitt et al. in
press). It is only when pigment densities fall below a threshold that the coral colonies experience coral
bleaching. In this context, coral bleaching describes a condition in which a catastrophic reduction in
pigment density results in a dysfunctional holobiont (Dove et al. 2006).
+Pressure
Figure 6. Effect of multiple
scattering by coral skeletons on
the effi ciency of energy
collection at different Chl a
densities. Left-hand diagram
> 6 mg chl a m-2
0.25
6
depicts the interaction under
normal circumstances (green)
where small losses of
0.2
5
pigmentation occurs to adjust
-Pressure
light harvesting without a major
Bleaching
Amplification factor
)
increase in internal light fi elds,
-1
+Pressure
0.15
4
Limits of seasonal variation
and stress situations where the
and photoacclimation
loss of pigment leads to a
mg Chl a
positive feedback loop in terms
-2
0.1
3
(m
of pigment and amplifying light
Specific absorption
fi elds. The right-hand diagram
0.05
2
reveals where these conditions
lie in the spectrum of densities
of chlorophyll. The y-axis
0
1
indicates the specifi c absorption
0
20
40
60
80
100
120
140
+Pressure
by chloroform as well as the
Chl a density (mg m-2)
amplifi cation factor.
+Pressure
b. Identifi cation of the initial target of thermal stress
One of the most general responses to thermal stress in symbiotic corals is a reduction of the photosynthesis
to respiration ratio, suggesting that algal photosynthesis is probably the most thermo-labile component of
the holobiont (Franklin et al. 2006; Ainsworth et al. 2008b). Early work on this area revealed that thermal
stress uncouples light harvesting and photochemistry and that event is suffi cient to trigger several
compensatory mechanisms to restore normal energy fl ow (Dove et al. 2006; Dove et al. 2008). To date,
several possible targets for the observed uncoupling have been identifi ed: lipid phase transition, damage
of photosystem II or its repair cycle, and inactivation of key enzymes in the carbon fi xation pathway (Jones
et al. 1998). Although there is still controversy about the initial target of thermal stress, all studies concur
that the loss of alga photosynthetic function is one of the earliest signs of thermal stress (Fitt et al. 2009).
37
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
c. Compensatory mechanisms and the propagation of thermal stress
Upon the onset of thermal or any other stress condition (Nakamura et al. 2005; Dove et al. 2006; Leggat et
al. 2006; Shenkar et al. 2006; Anthony et al. 2008; Dove et al. 2008), the reduction in the photosynthetic
1
activity of the symbiotic algae is sensed as an imbalance between the total solar radiation collected by the
photosynthetic antenna and the amount of sinks for this solar energy. The fi rst response to this imbalance
is the down regulation of the photosynthetic antenna and the up regulation of the enzymes acting as sinks,
in a process very similar to high-light photoacclimation (Rodríguez-Román et al. 2006; Papina et al. 2007).
At this stage thermal stress has been sensed as light stress that triggers a reduction in the optical cross
section of the algae (Dove et al. 2006). Coral bleaching may be the result of an uncontrolled high-light
photoacclimation mediated by the optical properties of the coral skeleton.
d. Multiple scattering by the coral skeleton increases light stress
Multiple scattering by the aragonite coral skeletons (Figure 7) increases dramatically the effi ciency of solar
radiation collection (Enriquez et al. 2005). Depending on the Chl a densities of the tissue, the amplifi cation
of the internal light fi elds results in an 8-fold increase in the effi ciency of solar collection (Figure 6). In this
context, when the reductions in the optical cross section of the symbiotic algae respond to thermal stress,
they further propagate the damage as cells are exposed to a more intense solar radiation fi eld in a positive
feedback loop (Rodríguez-Román et al. 2006). The deleterious effects of light amplifi cation by multiple
scattering by the coral skeleton are not restricted to the algae and to visible radiation; higher ultra violet
exposures are responsible for the accumulation of DNA damage under bleaching conditions and to the
propagation of oxidative stress (Lesser 2006; Fitt et al. 2009). Uncontrolled oxidative stress is responsible
for the induction of apoptosis or necrosis that leads to coral mortality (Dunn et al. 2004).
Figure 7. Multiple
scattering of light by the
aragonite crystals of the
coral skeleton. Both
panels were illuminated
by a laser beam.
Photo: R. Iglesias-Prieto
38
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Key literature generated with full/partial project support:
1.
Ainsworth TD, Hoegh-Guldberg O, Heron SF, Skirving WJ, Leggat W (2008) Early cellular changes are indicators of pre-bleaching thermal stress in the coral host. Journal of
Experimental Marine Biology and Ecology 364:63-71
1
2.
Anthony KR, Kline DI, Diaz-Pulido G, Dove S, Hoegh-Guldberg O (2008) Ocean acidifi cation causes bleaching and productivity loss in coral reef builders. Proceedings of the
National Academy of Sciences USA 105:17442-17446
3.
Anthony KRN, Connolly SR, Hoegh-Guldberg O (2007) Bleaching, energetics and coral mortality risk: effects of temperature, light and sediment regime. Limnology and
Oceanography 52:716-726
4.
Apprill AM, Bidigare RR, Gates RD (2007) Visibly healthy corals exhibit variable pigment concentrations and symbiont phenotypes. Coral Reefs 26:387-397
5.
Biel KY, Gates RD, Muscatine L (2007) Effects of free amino acids on the photosynthetic carbon metabolism of symbiotic dinofl agellates. Russian Journal of Plant Physiology
54:171-183
6.
Dove S, Ortiz JC, Enríquez S, Fine M, Fisher P, Iglesias-Prieto R, Thornhill D, Hoegh-Guldberg O (2006) Response of holosymbiont pigments from the scleractinian coral
Montipora monasteriata to short-term heat stress. Limnology and Oceanography 51:1149-1158
7.
Dove SG, Lovell C, Fine M, Deckenback J, Hoegh-Guldberg O, Iglesias-Prieto R, Anthony KRN (2008) Host pigments: potential facilitators of photosynthesis in coral
symbioses. Plant Cell and Environment 31:1523-1533
8.
Dunn SR, Thomason JC, Le Tissier MD, Bythell JC (2004) Heat stress induces different forms of cell death in sea anemones and their endosymbiotic algae depending on
temperature and duration. Nature - Cell Death & Differentiation 11:1213-1222
9.
Edmunds PJ, Gates RD (2008) Acclimatization in tropical reef corals. Marine Ecology Progress Series 361:307-310
10.
Edmunds PJ, Gates RD, Leggat W, Hoegh-Guldberg O, Allen-Requa L (2005) The effect of temperature on the size and population density of dinofl agellates in larvae of the
reef coral Porites astreoides. Invertebrate biology 124:185-193
11.
Fitt WK, Gates RD, Hoegh-Guldberg O, Bythell JC, Jatkar A, Grottoli AG, Gomez M, Fisher P, Lajuenesse TC, Pantos O, Iglesias-Prieto R. ,Franklin DJ, RodriguesLJ,
Torregiani JM, van Woesik R, Lesser M.P. (2009) Response of two species of Indo-Pacifi c corals, Porites cylindrica and Stylophora pistillata, to short-term thermal stress:
The host does matter in determining the tolerance of corals to bleaching. Journal of Experimental Marine Biology and Ecology 373:102-110
12.
Fitt WK, Kemp DW, Hernadez-Pech X, Iglesias-Prieto R, Thornhill DJ, Bruns BU, Schmidt GW (in press) Bleaching, El Niño, and la Niña: 13 years of seasonal analysis of reef-
building corals in Florida, the Bahamas, and the Caribbean. 11th International Coral Reef Symposium, Ft Lauderdale, USA
13.
Franklin DJ, Cedrés CMM, Hoegh-Guldberg O (2006) Increased mortality and photoinhibition in the symbiotic dinofl agellates of the IndoPacifi c coral Stylophora pistillata
(Esper) after summer bleaching. Marine Biology 149:633-642
14.
Hoegh-Guldberg O, Fine M, Skirving W, Johnstone R, Dove S, Strong A (2005) Coral bleaching following wintry weather. Limnology and Oceanography:265-271
15.
Hoegh-Guldberg O, Muller-Parker G, Cook CB, Gates RD, Gladfelter E, Trench RK, Weis VM (2007) Len Muscatine (19322007) and his contributions to the understanding
of algal-invertebrate endosymbiosis. Coral Reefs 26:731-739
16. Leggat W, Ainsworth TD, Dove S, Hoegh-Guldberg O (2006) Aerial exposure infl uences bleaching patterns. Coral Reefs 25:452-452
17. Lesser MP (2006) Oxidative stress in marine environments: biochemistry and physiological ecology. Annual Review Physiology 68:253-278
18.
Muller EM, Rogers CS, Spitzack AS, van Woesik R (2008) Bleaching increases likelihood of disease on Acropora palmata (Lamarck) at Hawksnest Bay, St. John, US Virgin
Islands. Coral Reefs 27:191-195
19.
Nakamura T, van Woesik R, Yamasaki H (2005) Photoinhibition of photosynthesis is reduced by water fl ow in the reef-building coral Acropora digitifera. Marine Ecology
Progress Series 301:109-118
20. Obura DO (2009) Reef corals bleach to resist stress. Marine Pollution Bulletin 58:206-212
21.
Papina M, Meziane T, van Woesik R (2007) Acclimation effect on fatty acids of the coral Montipora digitata and its symbiotic algae. Comparative Biochemistry and Physiology
B 147:583-589
22.
Rodríguez-Román A, Hernández-Pech X, Thomé PE, Enríquez S, Iglesias-Prieto R (2006) Photosynthesis and light utilization in the Caribbean coral Montastraea faveolata
recovering from a bleaching event. Limnology and Oceanography 51:2702-2710
23. Shenkar N, Fine M, Kramarsky-Winter E, Loya Y (2006) Population dynamics of zooxanthellae during a bacterial bleaching event. Coral Reefs 25:223-227
24.
Thompson DM, van Woesik R (2009a) Corals escape bleaching in regions that recently and historically experienced frequent thermal stress. Proceedings of The Royal Society
B 10.1098/rspb.2009.0591
25. van Oppen MJ, Gates RD (2006) Understanding the resilience of reef corals: the roles of molecular biology and genetics. Molecular Ecology 15:3863-3883
26. van Oppen MJH, Leong JA, Gates RD (2009) Coral-virus interactions: A double-edged sword? . Symbiosis:1-8
39
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Project 3. Geographical diversity of Symbiodinium
1
Leonard Chauka, William K. Fitt, Ove Hoegh-Guldberg, Dusty Kemp, Todd LaJeunesse, and Daniel T. Pettay.
Locations: Australasian CoE, Mesoamerican CoE, East African CoE, Palau International Coral Reef Center,
Phuket Thailand, Hawaii Institute of Marine Biology, Australian Institute of Marine Science, Florida Keys,
Caribbean Marine Research Center, *João Pessoa Brazil, *Curaçao Dutch Antilles (Figure 8).
2
5
1
4
6
3
1. Zanzibar, Tanzania
4. Central GBR, Australia
GEF funded 2002-2009
2. Phuket, Thailand
5. Republic of Palau
NSF and other funded
3. Southern GBR, Australia
6. Joao Pessoa, Brazil
Important gaps in knowledge
Figure 8. Sampling locations to assess the diversity of Symbiodinium on a broad scale.
Key results
This project provided direct support for and played a signifi cant role in the establishment of a worldwide
database of Symbiodinium genetics. The results indicated that there are marked regional differences in the
diversity and ecological dominance of symbiotic algae. These patterns are probably infl uenced by long-
standing environmental conditions and/or from historical changes in climate during transitions between
geological periods. Coral-algal symbioses are highly responsive to change through partner recombination
but these processes may require time scales of centuries or more in duration. While there is high host-
symbiont specifi city, most Indo-Pacifi c coral communities are often dominated by one, or sometimes two,
host-generalist symbionts and therefore many coral colonies on a particular Indo-Pacifi c reef often harbor
the same species of symbiont.
Background
Any thorough investigation into the biology of reef-
building corals must account for the fact that they are fi rst
and foremost symbiotic organisms that require internal
algae for their growth and survival (Figure 9). These very
combinations are sensitive to environmental stressors,
especially episodes of high sea surface temperatures.
While much is known about the diversity and distribution
of corals, virtually nothing was known about the diversity
and distribution of their essential symbionts until now. This
project set out to accurately describe the symbiont diversity
and distribution among various host taxa from reef
communities all over the world. Conducting diversity
surveys in different regions of the tropics provides insight
into how geographic isolation, environmental conditions,
and host biology infl
uence the evolution between Figure 9. Symbiodinium cells under light microscope.
Scale bar = 5 m Photo: T. Lajeunesse
endosymbionts and their coral hosts (LaJeunesse 2005a).
40
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
For example, many western Pacifi c reef systems are periodically impacted by episodes of thermal stress
resulting in mass bleaching and mortality. In contrast, coral communities in the Eastern Indian Ocean (i.e.
1
Andaman Sea) have suffered little from these episodes. Do differences in the diversity and physiology of
symbionts between these regions explain in part their resilience to stress? The biogeographic and ecological
patterns produced by this work provide critical information regarding how symbioses from various regions
will respond to global warming over decadal time scales. Furthermore, these data provide the basis for
comparative physiological analyses and developing testable hypotheses regarding the tolerance and
resilience of particular partner combinations to increased temperatures.
Methods
We conducted general surveys of the zooxanthellae biodiversity found across the community of symbiotic
invertebrates (especially stony corals, but included soft corals, anemones, zoanthids etc) from reef systems
around the world. In order to maximize the characterisation and identifi cation of biodiversity, we sampled
from the widest diversity of hosts as was possible. We learned that most hosts show remarkable specifi city
for particular symbionts at certain depths/environments. Small fragments or clippings (2-3 square cm in
area) from various symbiotic reef invertebrates including hard corals, soft corals, anemones, and
corallimorphs were collected by free diving or SCUBA at several sites within each regional location. Upon
return to the fi eld station, samples were processed in one of two ways. The fragments were either preserved
directly in a high salt buffer containing EDTA and DMSO or the living tissue was airbrushed off the skeleton,
homogenized, and centrifugation to pellets of 10-50 mg of Symbiodinium cell material which was then
preserved in the preservation buffer (LaJeunesse et al. 2003). DNA extractions and molecular genetic
analyses were conducted at the home research laboratories of Fitt and LaJeunesse. PCR-denaturing
gradient gel electrophoresis analysis targeting the internal transcribed spacer regions (ITS 1 and ITS 2) was
used to determine the genetic identity of the symbiont population in each sample.
Following the completion of the project, data are to be included in a worldwide database of symbiont
diversity available online to researchers (www.auburn.edu/~santos/sd2_ged.htm).
Results and discussion
This study has provided fundamental and exciting knowledge about the diversity and biogeography of
coral symbionts. The global perspective still remains very limited but these studies have generated an
informed perspective regarding the extent of diversity and how these systems evolve in isolated regions
with different long-standing environmental conditions. A total of seven reef systems were surveyed
including the southern GBR (2002, ~190 samples); the central GBR (2003, ~300 samples); Zamami Island,
Japan (~120 samples); Phuket, Thailand (2007, ~500 samples); Zanzibar, Tanzania (2007, ~350 samples);
Joao Pessoa, Brazil (2008, ~100 samples); and The Republic of Palau (2009, ~500 samples). While each
region differs in coral diversity, the symbioses for approximately 70 to 90 percent of host genera found in
each region were preliminarily described. Much of the Symbiodinium diversity characterised by this work
was new to science and comprised well over 100
ecologically and genetically distinct symbiont taxa. Each
community contained numerous regionally unique species
as well as a few host-generalists that exhibited broader
ecological and geographic distributions. The similarity and
differences between symbiont community assemblages
correspond to distances separating each location. For
example, there was a clear biogeographic break in the
symbiont diversity between the southern and central GBR.
However these communities were far more similar to each
other than when compared to symbiont communities from
the Andaman Sea, Thailand. Preliminary analyses of
Brazilian corals indicate that it is very similar to the
Caribbean, but these communities possess some notable
differences in host-symbiont associations.
Figure 10. Mass coral bleaching in the Caribbean in
2005. Bleached and unbleached colonies were
surveyed. Photo: H. Oxenford
41
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
All the Pacifi c coral communities surveyed were dominated by symbiont species in Clade C. Many of these
symbionts exhibit greater sensitivity to thermal stress. Members of Clade D Symbiodinium were very
1
common among hosts in the Andaman Sea. The prevalence of Clade D in certain coral dominated
ecosystems correlates with environments experiencing extreme seasonal changes in temperature and
turbidity. The long-standing environmental conditions characteristic of the Andaman Sea including low
water fl ow, wide fl uctuations in turbidity, and exposure to higher sea surface temperatures relative to most
regions in the Pacifi c, may explain the ecological success and dominance of this thermally tolerant
Symbiodinium lineage.
Key literature generated with full/partial project support:
1.
Apprill AM, Gates RD (2007) Recognizing diversity in coral symbiotic dinofl agellate communities. Molecular Ecology 16:1127-1134
2.
Gómez-Cabrera MC, Ortiz J, Loh W, Ward S, Hoegh-Guldberg O (2008) Acquisition of symbiotic dinofl agellates (Symbiodinium ) by juveniles of the coral Acropora
longicyathus. Coral Reefs 27:219-226
3.
Iglesias-Prieto R, Beltran VH, LaJeunesse TC, Reyes-Bonilla H, Thome PE (2004) Different algal symbionts explain the vertical distribution of dominant reef corals in the
eastern Pacifi c. Proceedings of the Royal Society B 271:1757-1763
4.
Kemp DW, Fitt WK, Schmidt GW (2008) A microsampling method for genotyping coral symbionts. Coral Reefs 27:289-293
5.
Kemp DW, Hernadez-Pech X, Iglesias-Prieto R, Schmidt GW, Fitt WK (in press) Micro-niche partitioning and the photobiology of Symbiodinium associated with Montastraea
faveolata 11th International Coral Reef Symposium, Ft Lauderdale, USA
6.
LaJeunesse TC (2005) "Species" radiations of symbiotic dinofl agellates in the Atlantic and Indo-Pacifi c since the miocene-pliocene transition. Molecular Biology and
Evolution 22:570-581
7.
Lajeunesse TC, Bhagooli R, Hidaka M, DeVantier L (2004) Closely-related Symbiodinium spp. differ in relative dominance in coral reef host communities across environmental,
latitudinal and biogeographic gradients. Marine Ecology Progress Series 284:147161
8.
LaJeunesse TC, Loh W, Trench RK (2009) Do introduced endosymbiotic dinofl agellates `take'to new hosts? Biological Invasions 11:995-1003
9.
LaJeunesse TC, Loh WKW, van Woesik R, Hoegh-Guldberg O, Schmidt GW, Fitt WK (2003) Low symbiont diversity in southern Great Barrier Reef corals, relative to those
of the Caribbean. Limnology and Oceanography 48:2046-2054
10.
LaJeunesse TC, Pettay DT, Sampayo EM, Phongsuwan N, Brown BE, Obura D, Hoegh-Guldberg O, Fitt WK (submitted) Regional differences in diversity and dominance
of endosymbiotic dinofl agellates among Indian Ocean reef coral communities. Journal of Biogeography
11.
LaJeunesse TC, Reyes Bonilla H, Warner ME, Wills M, Schmidt GW, Fitt WK (2008) Specifi city and stability in high latitude eastern Pacifi c coral-algal symbioses. Limnology
and Oceanography 53:719-727
12. LaJeunesse TC, Reyes-Bonilla H, Warner ME (2007) Spring "bleaching" among Pocillopora in the Sea of Cortez, Eastern Pacifi c. Coral Reefs 26:265-270
13. Manning MM, Gates RD (2008) Diversity in populations of free-living Symbiodinium from a Caribbean and Pacifi c reef. Limnology and Oceanography 53:1853-1861
14.
Pettay DT, LaJeunesse TC (2007) Microsatellites from clade B Symbiodinium spp. specialized for Caribbean corals in the genus Madracis. Molecular Ecology Notes 7:
1271-1274
15.
Pettay DT, Lajeunesse TC (2009) Microsatellite loci for assessing genetic diversity, dispersal and clonality of coral symbionts in `stress-tolerant' Symbiodinium clade D
Molecular Ecology Resources 9:1022-1025
16. Sampayo EM, Franceschinis L, Hoegh-Guldberg O, Dove S (2007) Niche partitioning of closely related symbiotic dinofl agellates. Molecular Ecology 16:3721-3733
17.
Sampayo EM, Ridgway T, Bongaerts P, Hoegh-Guldberg O (2008) Bleaching susceptibility and mortality of corals are determined by fi ne-scale differences in symbiont type.
Proceedings of the National Academy of Sciences 105:10444-10449
18. Stat M, Gates RD (2008) Vectored introductions of marine endosymbiotic dinofl agellates into Hawaii. Biological Invasions 10:579-583
19.
Stat M, Loh WKW, Hoegh-Guldberg O, Carter DA (2008) Symbiont acquisition strategy drives host-symbiont associations in the southern Great Barrier Reef. Coral Reefs
27:763-772
20. Stat M, Morris E, Gates RD (2008) Functional diversity in coral-dinofl agellate symbiosis. Proceedings of the National Academy of Sciences 105:9256-9261
21. Stat M, Pochon X, Cowie ROM, Gates RD (in press) Specifi city in communities of Symbiodinium in corals from Johnston Atoll. Marine Ecology Progress Series
22.
Thornhill DJ, Daniel MW, LaJeunesse TC, Schmidt GW, Fitt WK (2006a) Natural infections of aposymbiotic Cassiopea xamachana scyphistomae from environmental pools
of Symbiodinium. Journal of Experimental Marine Biology and Ecology 338:50-56
23.
Thornhill DJ, Kemp DW, Bruns BU, Fitt WK, Schmidt GW (2008) Correspondence between cold tolerance and temperate biogeography in Western Atlantic Symbiodinium
(Dinophyta) lineage. Journal of Phycology 44:1126-1135
24.
Thornhill DJ, LaJeunesse TC, Kemp DW, Fitt WK, Schmidt GW (2006b) Multi-year, seasonal genotypic surveys of coral-algal symbioses reveal prevalent stability or
post-bleaching reversion. Marine Biology 148:711-722
42
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Project 4. Functional diversity of Symbiodinium (diversity and function)
1
Sophie Dove, Ruth Gates, Ove Hoegh-Guldberg, Bill Leggat, Michael Lesser, Roberto Iglesias-Prieto, and
Eugenia Sampayo.
Location: Australasian CoE, Mesoamerican CoE, and East African CoE
Key results
The key symbionts of reef-building corals are dinofl agellate protists belonging to the genus Symbiodinium.
Recent genetic studies have identifi ed large differences between Symbiodinium occupying different host
species, indicating potentially hundreds of different species. At the outset of this project our understanding
of the differences between species of Symbiodinium was confi ned to a number of non-coding sequences
such as 18S, 28S and ITS ribosomal sequences. This project made a major contribution to fi lling this
particular gap in our understanding of Symbiodinium by expanding the number of sequenced genes from
a little over 10 to over 1450. While the function of many of these proteins remains to be identifi ed, the
function of over 560 unique genes were identifi ed into broad categories. These included functions within
areas such as post-translational modifi cation, protein turnover, stress chaperones (12.3%) and energy
production and conversion (12%). The results of this project have established an important platform
for exploring the major responses of Symbiodinium to stresses such as those arising from climate change,
and for exploring the underlying differences between reef-building corals in their response to
environmental stress.
Background
Much of the discussion about the evolution of Symbiodinium (the key symbiont of reef-building corals) has
occurred without considering the functional differences that may or not occur between different strains.
The pioneering work of Trench, Schoenberg, Blank, Fitt, Iglesias-Prieto, Chang and others has been set
aside by many studies that now focus on diversity using non-functional genetic differences (e.g. 18S, 28S,
ITS ribosomal sequences; (Rowan and Powers 1992; Rowan et al. 1996; Baker 2001b). These studies have
equated the detected genetic differences with functional differences despite the lack of fi rm evidence to
confi rm this.
However, understanding the functional behaviour of the different genotypes is also extremely important.
For example, differences in tolerance have been equated to differences between Symbiodinium clades.
It is possible, however, that the differences are because of the coral host and are unrelated to differences
in ribosomal gene sequences between Symbiodinium clades. Quite clearly, documenting the differences
that exist between the different clades (A-F) is a priority if we are to understand the underlying driving
forces for evolutionary change.
To do this, an expressed sequence tag (EST) library was constructed from a stressed coral (Acropora aspera)
and the resulting library extensively sequenced. The full details of the method is described in Leggat et al
(2007a). This project began with a planning workshop in Mexico in May 2005. This workshop reviewed the
available data and established a number of collaborative projects among BWG members, drawing on
appropriate expertise from the international community of experts on Symbiodinium and related organisms.
Results and discussion
Information on the genetic makeup of the key symbiont of reef-building corals, Symbiodinium, was
extremely limited. At the start of the BWG project, only 35 unique genes had been characterized from
symbiotic and nonsymbiotic dinofl agellate species, and a number of these genes (e.g., form-II RUBISCO,
peridinin-chlorophyll-binding protein [PCP]) had illustrated how dissimilar dinofl agellates are from other
phototrophs. This led to a major focus within this project on improving our understanding of gene expression
patterns of Symbiodinium. The full results were published in 2007 (Leggat et al. 2007a). As a result of this
focus, the project directly identifi ed 1456 unique expression sequence tags (ESTs) for Symbiodinium (clade
C3) from the staghorn coral Acropora aspera exposed to a variety of stresses. Of these, only 10% matched
previously reported dinofl agellate ESTs, suggesting that the conditions used in the construction of the
library resulted in a novel transcriptome.
43
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
The function of 561 (44%) of these ESTs were identifi ed. The majority of these genes coded for proteins
involved in post-translational modifi cation, protein turnover, and chaperones (12.3%); energy production
1
and conversion (12%); or an unknown function (18.6%). Table S1 outlines Heat shock and related expression
elements, while Table S2 lists the major groups found.
The most common transcript found was a homologue to a bacterial protein of unknown function. This algal
protein is targeted to the chloroplast and is present in those phototrophs that acquired plastids from the
red algal lineage. An additional 48 prokaryote-like proteins were also identifi ed, including the fi rst glycerol-
phosphate antiporter from dinofl agellates. A protein was also found with similarity to the fungiarchael
bacterial heme catalase peroxidases. A variety of stress genes were identifi ed, in particular heat-shock
proteins and proteins involved in ubiquitin cascades. This study represented the fi rst transcriptome from
the unicellular component of a eukaryoteeukaryote symbiosis. The complete results have been made
available to the research community through Gene Bank, and have generated considerable research activity
within the BWG and in the broader research community. It is next to impossible to concisely describe the
complete set of activities that have been stimulated by this project because of the large number of satellite
projects that spawned from these investigations.
Table S1. Symbiodinium Hsp proteins and their co-chaperones and those proteins involved in the ubiquitin degradation cycle.
Expressed during the application of heat, light, nutrient and inorganic carbon stress conditions.
Gene Name
No. of
Length
Best Match
Bit
e-value
Accession
sequences
(bp)
score
number
SyHsp100
1
519
Arabidopsis thalina AtC1pC
133
2x10-30
DQ144975
SyHsp90 1a
1
826
C. cohn ii Hsp90
419
1x10-116
DQ144976
SyHsp90 2a
1
788
C. cohn ii Hsp90
427
1x10-118
DQ144977
SyHsp90 3
15
1326
C. cohn ii Hsp90
722
0
DQ144978
SyHsp70
9
1147
C. cohn ii Hsp70
545
1x10-154
DQ144979
SyDNAJ 1
8
1185
Apis mellifera DNAJ
324
2x10-87
DQ144980
SyDNAJ 2
3
994
Plasmodium chabaudi DNAJ
101
3x10-20
DQ144981
SyDNAJ 3
1
1022
Mus musculus DNAJ
257
4x10-67
DQ144982
SyDNAJ 4
1
719
Thermosynechococcus elongatus
119
1x10-25
EH036974
Syp23
1
517
Crytosporidium parvum p23
82
8x10-15
DQ144983
co-chaperone
Poly-ubiquitin (SyUb)
1
583
Encephalitozoon cuniculi ubiquitin
337
1x10-91
DQ144984
Ubiquitin-conjugating
2
641
Plasmodium falciparum ubiquitin
231
2x10-59
DQ144985
enzyme (SyUbc1)
conjugating enzyme (putative)
Ubiquitin-conjugating
1
401
Plasmodium yoelii yoelii ubiquitin-
145
5x10-34
DQ144986
enzyme (SyUbc2)
conjugating enzyme
Ubiquitin-conjugating
2
805
Phytophthora infestans ubiquitin-
133
7x10-30
DQ144987
enzyme (SyUbc3)
conjugating enzyme
Ubiquitin-conjugating
1
618
Phytophthora infestans ubiquitin-
191
6x10-48
DQ144988
enzyme (SyUbc4)
conjugating enzyme
Ubiquitin ligase (SyUbr1)
1
459
H. sapiens ubiquitin ligase protein
50
2x10-5
DQ144989
CHFR
Ubiquitin ligase (SyUbr2)
1
557
D. rerio ubiquitin ligase Siah2
68
3x10-10
DQ144990
Ubiquitin-specifi c
4
976
H. sapiens ubiquitin specifi c
81
6x10-14
DQ144991
protease (SyUbp1)
proteinase 40
Ubiquitin C-terminal
1
722
Oryza sativa putative ubiquitin
189
2x10-46
DQ144992
hydrolase (SyUbch1)
C-terminal hydrolase
a These two ESTs both code for the same region of Hsp90; the identity at the amino acid level is 99.6%, (215/216 a.a. identical), while at the NDA level, identity is 89%.
44
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Table S2. Symbiodinium ESTs that match best to bacterial genes (see Leggat et al. 2007a for full description).
1
Tentative protein identifi cation
Present in other
Accession number
Present in other
dinofl agellate ESTs
eukaryote ESTs
(e-value)
(e-value < 1 × 105)
Bacl-1
Yes (2 × 1090)
EF138814
Yes
Bacl-2
Yes ( 4 × 1094)
EH037640, EH058151, EH037638,
Yes
EH037639, EH037641, EH058149,
EH037642, EH037643, EH037644,
EH037645, EH037647, EH037650,
EH037646, EH058148, EH037652
Sugar permease
No
EF138816
Yes
Heat caspase 1containing protein
Yes (1 × 1013)
EH036199, EH036200, EH036201
No
Lipoprotein
Yes (2 × 1024)
EH036655, EH036656
No
Uncharacterized conserved
No
EH037155
Yes
bacterial protein
Serine/threonine protease
Yes (8 × 107)
EH037135
Yes
Syringomycin synthesis regulator
Yes (5 × 1021)
EH058140
Yes
Streptavidin
No
EH036842
Yes
Pirin
Yes (1 × 1062)
EH037858, EH037857, EH037856,
Yes
EH057961
Xanthine/uracil permease
No
EH037487, EH058028
Yes
Transporter
No
EH037119
Yes
Cytochrome p450
Matches to Apicomplexa EH036606, EH036607
Yes
(3 × 109)
Ammonium transporter
Yes (8 × 1015)
EH037820, EH037819
Yes
Sulfate transporter
No
EH036081, EH036083, EH036084,
No
EH036085
ß-lactamase inhibitor
Yes (3 × 1048)
EH037946,
Yes
ß-lactamase inhibitor
Yes (1 × 1048)
EH037520, EH037519
Yes
ß-lactamase inhibitor
Yes (4 × 1048)
EH037943, EH037944
Yes
ß-lactamase inhibitor
Yes (8 × 1048)
EH037945
Yes
Cyclophilin-peptidyl propyl
Yes (3 × 1017)
EH036698
Yes
isomerase
DNAJ
No
EH036974
Yes
Cell-surface protein
No
EH037161
Yes
Glycosyl transferase
Yes (4 × 10-45)
EH038071, EH038066
Yes
Ribonuclease H1
No
EH036802
Yes
Modifi cation methylase
Yes (7 × 10-8)
EH037728, EH037730
Yes
DNA modifi cation methylase
Yes (4 × 10-4)
EH038195
No
Acetyl transferase
No
EH036135, EH036134
Yes
Diacylglycerol transferase
Yes (2 × 10-24)
EH036135, EH036134
Yes
L-carnitine dehydratase
No
EH058162
Yes
Phosphoserine aminotransferase
Yes ( 4 × 10-102)
EH037087
Yes
Glycosyl transferase
Yes (5 × 10-47)
EH037619, EH037620, EH037618,
Yes
EH037617, EH037614, EH037612,
EH037616, EH037610, EH037609,
EH037611
Glycosyl transferase
No
EH037613
Yes
Glycosyl transferase
Yes (9 × 10-39)
EH037621
Yes
Pyruvate orthophosphate
No
EH038113, EH038114, EH038116
Yes
45
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Table S2. Symbiodinium ESTs that match best to bacterial genes (see Leggat et al. 2007a for full description).
Tentative protein identifi cation
Present in other
Accession number
Present in other
1
dinofl agellate ESTs
eukaryote ESTs
(e-value)
(e-value < 1 × 105)
Glycosyl transferase
Yes (2 × 10-38)
EH036023, EH036024, EH036025,
Yes
EH036026, EH036028
Phosphoglycerate mutase
Yes (2 × 10-64)
EH036823
Yes
Citrate lyase
No
EH036930
Yes
Polysaccharide deacetylase
No
EH037190
Yes
Thymidine kinase
Yes (4 × 10-21)
EH037522
Yes
Keto-acid reductoisomerase
Yes (8 × 10-22)
EH036341, EH036342
Yes
Aminotransferase
Yes (3 × 10-63)
EH058166
Yes
Glucose-inhibited division protein
No
EH037376
No
ATPase domaincontaining
Yes (9 × 10-74)
EH036068, EH036069, EH036070,
No
protein
EH036072
Cytochrome oxidase
Yes (3 × 10-53)
EH037670, EH037672, EH037673
Yes
Salicylate monoxygenase
No
EH037952, EH037953, EH037954,
Yes
EH037955
Key literature generated with Full/partial project support:
1.
Kvennefors ECE, Leggat W, Hoegh-Guldberg O, Degnan BM, Barnes AC (2008) An ancient and variable mannose-binding lectin from the coral Acropora millepora binds
both pathogens and symbionts. Developmental and Comparative Immunology 32:1582-1592
2.
Leggat W, Dixon R, Saleh S, Yellowlees D (2005) A novel carbonic anhydrase from the giant clam Tridacna gigas contains two carbonic anhydrase domains. FEBS Journal
272:3297-3305
3.
Leggat W, Hoegh-Guldberg O, Dove S, Yellowlees D (2007b) Analysis of an EST library from the dinofl agellate (Symbiodinium sp.) symbiont of reef-building corals. Journal
of Phycology 43:1010-1021
4.
Weis VM, Davy SK, Hoegh-Guldberg O, Rodriguez-Lanetty M, Pringe JR (2008) Cell biology in model systems as the key to understanding corals. Trends in Ecology &
Evolution 23:369-376
46
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Project 5. Host-symbiont mutualism, close associates, metabolic
communication and environmental change
1
John Bythell, Ove Hoegh-Guldberg, Mike P. Lesser, Ron Johnstone, and Christian Wild.
Location: Mesoamerican CoE, Australasian CoE, and Northern Red Sea
Key results
Understanding of the interactions of reef-building corals
and Symbiodinium, with the broader range of symbiotic
organisms associated with them, is critical to understanding
not only the basic biology of corals, but also their response
to stress and disease. This project set out to describe host
symbiont mutualism between corals, dinofl agellates and
bacteria, and resulted in a large number of new observations
and discoveries. The research identifi ed the critical role of
the mucus layer on corals (Figure 11) as a barrier to
microbial invasion, and concluded after extensive studies
that bacteria are rare within the tissues of corals. That said,
some corals do host specifi c bacteria. In this regard,
members of the BWG discovered the presence of nitrogen-
fi xing bacteria within coral tissues. These organisms appear
to be able to contribute inorganic nitrogen to the Figure 11. Branching staghorn coral releasing mucus
strings used in feeding and surface sediment cleaning.
metabolism of the resident Symbiodinium, avoiding the Southern Great Barrier Reef. Photo: J. Bythell
inhibiting high levels of oxygen by restricting their nitrogen-
fi xing activities to dawn and dusk. Members of the group
also explored the potential role of bacteria in causing bleaching, discovering that Vibrio and other bacterial
infections are most likely secondary rather than primary causes of bleaching and disease. It became clear
that thermal stress increases the incidence and susceptibility of corals to disease, which echoes results
discovered within the Disease Working Group of the CRTR Program. Research undertaken during this
project also identifi ed a series of coral host shutdown reactions that were mediated by programmed cell
death or apoptosis. In a series of ecosystem engineering projects, mucus released by coral was identifi ed
as a critical energy carrier and particle trap, thereby preventing loss of essential elements from the
oligotrophic reef system. Changes to reef processes were also identifi ed. These included changes to the
coral derived organic material release during bleaching and the escalation in nitrogen fi xation rates which
occurred on the surfaces of newly dead coral skeletons.
Background
The project has investigated two main themes a) the importance of microbial associates of coral in
maintaining health and in affecting the bleaching and disease processes, and b) identifi cation of the large-
scale biogeochemical processes that coral holobiont and external bacteria mediate on coral reefs and how
these are changed following bleaching and coral mortality. We now know that corals are very effective at
preventing microbial penetration of the tissues using effective surface mucus layer cleansing in a similar
way to the human gut mucosa (Brown and Bythell 2005). They also possess effective antimicrobials and
innate immunity systems (Palmer et al. 2009) in case the mucus barrier is penetrated. The normally benign
microfl ora of the outer mucus layer also releases antimicrobials that can suppress the growth of potential
pathogens. In combination, this results in typically very low numbers of bacteria in the tissues, with the
exception of specifi c cases of putative microbial symbiosis (Bythell et al. 2002; Lesser et al. 2007b; Ainsworth
et al. 2008a). Many studies have shown that this situation changes dramatically under stress, with a
consistent increase in potentially pathogenic microbes dominated by Vibrios (Lesser et al. 2007a). Following
stress, the microbial population may therefore exacerbate the bleaching process and is instrumental in the
post-bleaching disease processes that lead to death of the coral. Further research is needed to analyse
these processes to determine what microbial processes may lead to death or survival of the coral following
a stress event and whether there are any management interventions that can infl uence this outcome.
47
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
In addition, hermatypic corals are known to release large amounts of organic matter into their surroundings,
in quantities that often dominate the suspended matter in coral reefs. Mucus release, like coral bleaching,
1
is an unspecifi c response to environmental stress. The goal of this project was therefore to study (1) the
dynamics of coral holobiont-derived organic matter release, (2) assess its general ecological role for reef
functioning and its effect on associated microbial diversity, and (3) examine the activity as well as the link
between organic release and coral bleaching.
Methods
The work to examine microbial associates of corals has
mainly focussed on culture-independent 16S rRNA gene
analysis by PCR-DGGE (denaturing gel electrophoresis)
and fl
uorescence in situ hybridisation (FISH). These
techniques have been applied to a wide range of natural
and experimental manipulations.
A series of interconnected experiments were carried out in
order to assess biogeochemical processes and element
cycles in the investigated coral reef ecosystems (Figure
12). This included measurements of benthic oxygen fl uxes
using stirred benthic chambers. Benthic community
structure was determined by the use of line-point-intercept
transects. Dissolved and particulate organic matter release
by reef organisms was quantifi ed using diverse incubation
techniques with subsequent dissolved organic carbon
(DOC), particulate organic carbon (POC) and nitrogen (PN)
analyses in combination with stable isotope measurements
( 13C, 15N).
For the molecular diversity analyses of fi ngerprinting
techniques (ARISA and TRFLP) were used in combination
with clone libraries and quantitative analyses (FISH).
Microbial activity was measured by quantifi cation of
oxygen fl uxes in incubation experiments.
Several methodological papers (Holmes 2008; Laforsch et Figure 12. Experiment carried out at Heron Island to
al. 2008; Naumann et al. 2009) have been produced in determine longer-term effects of heat stress on
order to increase the accuracy of coral surface area microbial communities associated with corals (Acropora
quantifi cation as a critical reference unit for process Formosa) Photo: J. Bythell
measurements.
Results and discussion
We have substantially addressed all our initial hypotheses, H1: Predictable shifts in microbial communities
associated with coral occur because of environmental stress (Pantos et al. 2003; Guppy and Bythell 2006);
H2: Corals are at increased risk of developing microbially-mediated disease during and following bleaching
(Lesser et al. 2007a; Fitt et al. 2009); H3: Healthy corals have symbiotic microbial communities that may be
lost due to changing environmental conditions or be out-competed (Lesser et al. 2007b); H4: Populations
of specifi c pathogens (e.g. Vibrios) associated with corals are promoted during environmental stress (Pantos
and Bythell 2006; Ainsworth et al. 2007a; Ainsworth et al. 2007b). This has led to some important syntheses
(Leggat et al. 2007b; Lesser et al. 2007a) and new directions of research funded by other agencies to
investigate coral surface mucus layer dynamics, the specifi c relationship between temperature stress and
antimicrobial defences and coral innate immunity mechanisms.
48
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
This project also revealed a variety of new fi ndings related
to coral-algae-microbe interaction and the important role
1
of hermatypic corals as engineers of entire reef ecosystems.
Via complex habitat generation and the release of organic
materials, corals not only affect the diversity of associated
fauna and fl ora, but this also takes place for the microbial
level (Allers et al. 2008; Schöttner et al. in press). Inorganic
matter production by corals considerably affects pelagic-
benthic coupling and the ensuing processing involving
recycling of organic matter in reef ecosystems. This
highlights the role of coral-generated reef sands as
biocatalytical fi
lter systems with their typically high
abundances of heterotrophic microbes (Wild et al. 2006).
In addition, organic matter released by corals initiates
metabolic communication to a variety of other reef Figure 13. Mucus strings between the branches of a
staghorn coral at Heron Island. This mucus is primarily
organisms and element cycles, which contribute to rapid released by corals in order to clean their surfaces.
processing of organic matter pulses and to conserving However, this material can also function as an energy
essential nutrients within the reef ecosystem (Wild et al. carrier and particle trap. Photo: C. Wild
2004a; Wild et al. 2004b; Wild et al. 2004c; Wild et al.
2005; Huettel et al. 2006; Wild et al. 2008) see Figure 14. Phase-shifts from corals to benthic algae
following mass bleaching events also include quantitative and compositional changes in organic matter
production and release with biogeochemical consequences (Wild et al. in press).
mucus float
trapping of suspended particles,
ucus
insoluble mucus release
loss of phosphorus
C: 27.7 kmol d -1
water column
coral reef rim
N: 1.9 kmol d -1
P: 0.3 kmol d -1
undissolved m
ucus
mucus with particles
ucus
C: 181.8 kmol d -1
N: 17.0 kmol d -1
dissolved m
lved m
P: 0.2 kmol d -1
soluble mucus release
consumption by
isso
d
C: 90.9 kmol d -1
pelagic fauna
N: 7.6 kmol d -1
and bacteria
P: 1.3 kmol d -1
contribution to water oxygen consumption
0.1-2.5%
rapid sedimentation
permeable
consumption by
15.5% of
lagoon sediment
potential nutrient release
benthic fauna
lagoon water
N: 18.2 kmol d -1
and bacteria
filtered per day
P: 0.40 kmol d -1
contribution to sedimentary oxygen consumption
10-20%
carbon turnover
at least 7% per h
Figure 14. Biogeochemical element cycles initiated by the release of
coral mucus (suggested for Heron Island). Wild et al. (2004a).
49
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
Key literature generated with full/partial project support:
1.
Ainsworth TD, Fine M, Blackall LL, Hoegh-Guldberg O (2006) Fluorescence in situ hybridization and spectral imaging of coral-associated bacterial communities.
Applied and Environmental Microbiology 72:3016-3020
1
2.
Ainsworth TD, Fine M, Roff G, Hoegh-Guldberg O (2007a) Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica. International
Society for Microbial Ecology 2:67-73
3.
Ainsworth TD, Hoegh-Guldberg O (2008) Cellular processes of bleaching in the Mediterranean coral Oculina patagonica. Coral Reefs 27:593-597
4.
Ainsworth TD, Hoegh-Guldberg O (2009) Bacterial communities closely associated with coral tissues vary under experimental and natural reef conditions and thermal stress.
Aquatic Biology 4:289-296
5.
Ainsworth TD, Hoegh-Guldberg O, Leggat W (2008) Imaging the fl uorescence of marine invertebrates and their associated fl ora. Journal of Microscopy 232:197-199
6.
Ainsworth TD, KramaskyWinter E, Loya Y, Hoegh-Guldberg O, Fine M (2007b) Coral disease diagnostics: What's between a plague and a band? Applied and Environmental
Microbiology 73:981-992
7.
Ainsworth TD, Kvennefors EC, Blackall LL, Fine M, Hoegh-Guldberg O (2007c) Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef.
Marine Biology 151:19-29
8.
Allers E, Niesner C, Wild C, Pernthaler J (2008) Microbes enriched in seawater after the addition of coral mucus. Applied and Environmental Microbiology 74:3274-3278
9.
Brickner I, Oren U, Frank U, Loya Y (2006) Energy integration between the solitary polyps of the clonal coral Lobophyllia corymbosa. Journal of Experimental Biology
209:1690-1695
10. Brown BE, Bythell JC (2005) Perspectives on mucus secretion in reef corals. Marine Ecology Progress Series 296:291-309
11.
Bythell JC, Barer MR, Cooney RP, Guest JR, O'Donnell AG, Pantos O, Le Tissier MDA (2002) Histopathological methods for the investigation of microbial communities
associated with disease lesions in reef corals. Letters in applied microbiology 34:359-364
12. Bythell JC, Pantos O, Richardson LL (2004) White plague and other `white' diseases. In: Rosenberg E, Loya Y (eds) Coral health and disease. Springer-Verlag, New York
13. Davey M, Holmes G, Johnstone R (2008) High rates of nitrogen fi xation (acetylene reduction) on coral skeletons following bleaching mortality. Coral Reefs 27:227-236
14. Davy SK, Burchett SG, Dale AL, Davies P, Davy JE, Muncke C, Hoegh-Guldberg O, Wilson WH (2006) Viruses: agents of coral disease? Diseases of aquatic organisms 69:101-110
15. Efrony R, Loya Y, Bacharach E, Rosenberg E (2007) Phage therapy of coral disease. Coral Reefs 26:7-13
16.
Fine M, Meroz-Fine E, Hoegh-Guldberg O (2005) Tolerance of endolithic algae to elevated temperature and light in the coral Montipora monasteriata from the southern
Great Barrier Reef. Journal of Experimental Biology 208:75-81
17. Fine M, Roff G, Ainsworth TD, Hoegh-Guldberg O (2006) Phototrophic microendoliths bloom during coral "white syndrome". Coral Reefs 25:577-581
18.
Guppy R, Bythell JC (2006) Environmental effects on bacterial diversity in the surface mucus layer of the reef coral Montastraea faveolata. Marine Ecology Progress Series
328:133-142
19. Haas A, al-Zibdah M, Wild C (submitted-a) Seasonal in-situ monitoring of coral-algae interaction stability in fringing reefs of the Northern Red Sea Coral Reefs
20.
Haas A, el-Zibdah M, Wild C (submitted-b) Effects of inorganic and organic nutrient addition on direct competition between hermatypic corals and benthic reef algae in the
Northern Red Sea. Journal of Experimental Marine Biology and Ecology
21.
Hoegh-Guldberg O, Dove S (2007) Chapter 7 "Primary production, nutrient recycling and energy fl ow through coral reef ecosystems". In: Hutchings P., Kingsford M., Hoegh-
Guldberg O. eds) Great Barrier Reef: Biology, Environment and Management. CSIRO Press.
22.
Huettel M, Wild C, Gonelli S (2006) The mucus trap in coral reefs: formation and temporal evolution of aggregates caused by coral mucus. Marine Ecology Progress Series
307:69-84
23.
Hutchings, P. A. and Hoegh-Guldberg O (2007) Chapter 8 "The carbonate balance of coral reefs". In: Hutchings P., Kingsford M., Hoegh-Guldberg O .(eds) Great Barrier
Reef: Biology, Environment and Management. CSIRO Press.
24. Iwase A, Sakai K, Suzuki A, van Woesik R (2008) Phototrophic adjustment of the foliaceous coral Echinopora lamellosa in Palau. Estuarine, Coastal and Shelf Science 77:672-678
25.
Jantzen C, Wild C, Roa-Quiaoit H, El-Zibdah M, Richter C (2008) Photosynthetic performance of giant clams, Tridacna maxima and T. squamosa, in the Gulf of Aqaba, Red
Sea. Marine Biology 155:211-221
26.
Kaniewska P, Anthony KRN, Hoegh-Guldberg O (2008) Variation in colony geometry modulates internal light levels in branching corals, Acropora humilis and Stylophora
pistillata. Marine Biology 155:649-660
27. Kaniewska P, Campbell PR, Fine M, Hoegh-Guldberg O (2009) Phototropic growth in a reef fl at acroporid branching coral species. Journal of Experimental Biology 212:662-667
28. Kelman D, Kashman Y, Rosenberg E, Kushmaro A, Loya Y (2006) Antimicrobial activity of Red Sea corals. Marine Biology 149:357-363
29.
Klueter A, Loh W, Hoegh-Guldberg O, Dove S (2006) Physiological and genetic properties of two fl uorescent colour morphs of the coral Montipora digitata. Symbiosis
42:123-134
30.
Kramarsky-Winter E, Harel M, Siboni N, Ben Dov E, Brickner I, Loya Y, Kushmaro A (2006) Identifi cation of a protist-coral association and its possible ecological role. Marine
Ecology-Progress Series 317:67-73
31.
Laforsch C, Christoph E, Glaser C, Naumann M, Wild C, Niggl W (2008) A precise and non-destructive method to calculate the surface area of living scleractinian corals using
X-ray computed tomography and 3D modeling. Coral Reefs 27:811-820
32.
Leggat W, Ainsworth TD, Bythell JC, Dove S, Gates RD, Hoegh-Guldberg O, Iglesias-Prieto R, Yellowlees D (2007a) The hologenome theory disregards the coral holobiont.
Nature Reviews Microbiology 5
33.
Lesser MP, Bythell JC, Gates RD, Johnstone RW, Hoegh-Guldberg O (2007a) Are infectious diseases really killing corals? Alternative interpretations of the experimental and
ecological data. Journal of Experimental Marine Biology and Ecology 346:36-44
34.
Lesser MP, Falcón LI, Rodríguez-Román A, Enríquez S, Hoegh-Guldberg O, Iglesias-Prieto R (2007b) Nitrogen fi xation by symbiotic cyanobacteria provides a source of
nitrogen for the scleractinian coral Montastraea cavernosa. Marine Ecology Progress Series 346:143-152
35.
Mayer FW, Duewel S, Haas A, Jantzen C, Naumann M, Jeschke JM, Wild C (in press) A web-based information management solution for experimental data from the fi eld of
coral reef ecology 11th International Coral Reef Symposium Ft. Lauderdale, USA
36.
Mayer FW, Manasrah R, Mayr C, Wild C (submitted) Coral mucus via particle trapping initiates short linked element cycles in fringing reefs of the Northern Red Sea. Coral Reefs
37.
Middlebrook R, Hoegh-Guldberg O, Leggat W (2008) The effect of thermal history on the susceptibility of reef-building corals to thermal stress. Journal of Experimental
Biology 211:1050-1056
38.
Moore RB, Obornik M, Janouskovec J, Chrudimsky T, Vancova M, Green DH, Wright SW, Davies NW, Bolch CJS, Heimann K, Slapeta J, Hoegh-Guldberg O, Logsdon JM,
Carter DA (2008) A photosynthetic alveolate closely related to apicomplexan parasites. Nature 451:959-963
39.
Naumann M, Haas A, Struck U, Mayr C, el-Zibdah M, Wild C (submitted) Organic matter release by the dominant hermatypic corals of the Northern Red Sea. Limnology and
Oceanography
40.
Naumann M, Niggl W, Laforsch C, Glaser C, Wild C (2009) Coral surface area quantifi cation evaluation of established methods by comparison with computer tomography.
Coral Reefs 28:109-117
41.
Naumann M, Richter C, el-Zibdah M, Wild C (in press) Coral mucus as an effi cient trap for picoplanktonic cyanobacteria -implications for pelagic-benthic coupling in the reef
ecosystem Marine Ecology Progress Series
42.
Niggl W, Glas M, Laforsch C, Mayr C, Wild C (in press) First evidence of coral bleaching stimulating organic matter release by reef corals 11th International Coral Reef
Symposium Ft. Lauderdale, USA
50
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 1: Coral-symbiont responses to thermal stress
43.
Olson ND, Ainsworth TD, Gates RD, Takabayashi M (2009) Diazotrophic bacteria associated with Hawaiian Montipora corals: Diversity and abundance in correlation with
symbiotic dinofl agellates. Journal of Experimental Marine Biology and Ecology 371:140-146
44.
Pantos O, Bythell JC (2006) Bacterial community structure associated with white band disease in the elkhorn coral Acropora palmata determined using culture-independent
1
16S rRNA techniques. Diseases of aquatic organisms 69:79-88
45.
Rasheed M, Wild C, Franke U, Huettel M (2004) Benthic photosynthesis and oxygen consumption in permeable carbonate sediments at Heron Island, Great Barrier Reef,
Australia. Estuar Coast Shelf Sci 59:139-150
46.
Rasheed M, Wild C, Jantzen C, Badran M (2006) Natural matter mineralization in the reef sediments of the Gulf of Aqaba. Chem Ecol 22:13-20
47. Reed K, Muller EM, van Woesik R (submitted) Coral immunology and resistance to disease. Diseases of aquatic organisms.
48.
Reimers CE, Stecher HA, Taghon GL, Fuller CM, Huettel M, Rusch A, Ryckelynck N, Wild C (2004) In situ measurements of advective solute transport in permeable shelf
sands. Cont Shelf Res 24:183-201
49. Reshef L, Koren O, Loya Y, Zilber-Rosenberg I, Rosenberg E (2006) The Coral probiotic hypothesis. Environmental Microbiology 8:2068-2073
50. Roff G, Hoegh-Guldberg O, Fine M (2006) Intra-colonial response to Acroporid "white syndrome" lesions in tabular Acropora spp.(Scleractinia). Coral Reefs 25:255-264
51.
Roff G, Kvennefors ECE, Ulstrup KE, Fine M, Hoegh-Guldberg O (2008) Coral disease physiology: the impact of Acroporid white syndrome on Symbiodinium. Coral Reefs
27:373-377
52.
Roff G, Ulstrup KE, Fine M, Ralph PJ, Hoegh-Guldberg O (2008) Spatial heterogeneity of photosynthetic activity within diseased corals from the Great Barrier Reef. Journal
of Phycology 44:526-538
53.
Schöttner S, Hoffmann F, Wild C, Rapp HT, Boetius A, Ramette A (in press) Inter- and intra- habitat bacterial diversity associated with cold water corals. The ISME Journal
54.
Smith JE, Shaw M, Edwards RA, Obura D, Pantos O, Sala E, Sandin SA, Smriga S, Hatay M, Rohwer FL (2006) Indirect effects of algae on coral: Algae-mediated, microbe-
induced coral mortality. Ecology Letters 9:835-845
55. Todd BD, Thornhill DJ, Fitt WK (2006) Patterns of inorganic phosphate uptake in Cassiopea xamachana: A bioindicator species. Marine Pollution Bulletin 52:515-521
56.
Torregiani JH, Lesser MP (2007) The effects of short-term exposures to ultraviolet radiation in the Hawaiian Coral Montipora verrucosa. Journal of Experimental Marine
Biology and Ecology 340:194-203
57.
Werner U, Bird P, Wild C, Ferdelman T, Polerecky L, Eickert G, Johnstone R, Hoegh-Guldberg O, deBeer D (2006) Spatial variability of aerobic and anaerobic mineralization
in coral reef sediments (Heron Island, Australia). Marine Ecology Progress Series 309:93-105
58.
Wild C (2004) Sediment-water coupling in permeable shallow water sediments, Vol 1. Peniope VLG, Munich, Germany
59.
Wild C (2007) Faszination, Bedeutung und Gefährdung von Korallenriffen in einer Zeit der globalen Veränderung. In: Höfer A, Rath D (eds) Deutschlands wahre Superstars
- 50 Zukunftsperspektiven junger Wissenschaftler. Heel Verlag, Königswinter, p 46-49
60. Wild C (in press) Reef-building scleractinian corals as ecosystem engineers. In: Wolanski E, McLusky D (eds) Treatise of Estuaries and Coastal Ecosystems, Vol 7. Elsevier
61.
Wild C, Haas A, Naumann M, Mayr C, el-Zibdah M (in press) Comparative investigation of organic matter release by corals and benthic reef algae implications for pelagic
and benthic microbial metabolism 11th International Coral Reef Symposium, Ft. Lauderdale, USA
62.
Wild C, Huettel M, Klueter A, Kremb SG, Rasheed M, Jørgensen BB (2004a) Coral mucus functions as an energy carrier and particle trap in the reef ecosystem. Nature
428:6670
63.
Wild C, Jantzen C (2008) Baumeister der Meere - Korallen als Ingenieure von Warm- und Kaltwasserriffen. In: Moldrzyk U, Heiss G (eds) ,,abgetaucht"- Begleitbuch zur
Sonderausstellung zum internationalen Jahr des Riffes 2008. Museum für Naturkunde der Humboldt-Universität, Berlin, p 171-182
64.
Wild C, Jantzen C, Niggl W, Haas A, Mayer FW, Naumann M (2008a) Konsequenzen des Klimawandels für Korallenriffe - mögliche Lösungsansätze. In: Moldrzyk U, Heiss G
(eds) ,,abgetaucht"- Begleitbuch zur Sonderausstellung zum internationalen Jahr des Riffes 2008 Museum für Naturkunde der Humboldt-Universität, Berlin, p 148-170
65.
Wild C, Jantzen C, Struck U, Hoegh-Guldberg O, Huettel M (2008b) Biogeochemical responses on coral mass spawning at the Great Barrier Reef: Pelagic-benthic coupling.
Coral Reefs 27:123-132
66. Wild C, Laforsch C, Huettel M (2006) Detection and enumeration of microbial cells in highly porous calcareous reef sands. Marine & Freshwater Research 57:415-420
67.
Wild C, Mayr C, Wehrmann L, Schöttner S, Naumann M, Hoffmann F, Rapp HT (2008c) Organic matter release by cold water corals and its implication for fauna-microbe
interaction. Marine Ecology Progress Series 372:67-75
68.
Wild C, Naumann M, Haas A, Struck U, Mayer FW, Huettel M (submitted) Coral sand O2 uptake and benthic-pelagic coupling in a subtropical fringing reef, Aqaba, Red Sea.
Aquatic Biology
69.
Wild C, Rasheed M, Jantzen C, Cook P, Struck U, Huettel M, Boetius A (2005a) Benthic metabolism and degradation of natural particulate organic matter in silicate and
carbonate sands of the Northern Red Sea. Marine Ecology Progress Series 298:69-78
70.
Wild C, Rasheed M, Werner U, Franke U, Johnstone R, M. H (2004b) Degradation and mineralization of coral mucus in reef environments. Marine Ecology Progress Series
267:159-171
71. Wild C, Røy H, Huettel M (2005b) Role of pelletization for mineralization in fi ne-grained coastal sediments. Marine Ecology Progress Series 291:23-33
72. Wild C, Tollrian R, Huettel M (2004c) Rapid recycling of coral mass spawning products in permeable reef sediments. Marine Ecology Progress Series 271:159-166
73. Wild C, Woyt H, Huettel M (2005c) Infl uence of coral mucus on nutrient fl uxes in carbonate sands. Marine Ecology Progress Seriers 287:87-98
51
2
Theme 2
Organismal mechanisms to
ecological outcomes
52
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Project 6. Population dynamics of coral populations
under environmental change
2
Eran Brokovich, Omri Bronstein, Jessica Gilner, Yossi Loya, Juan Carlos Ortiz, Rob van Woesik, and
Assaf Zvuloni.
Location: Mesoamerican CoE, Australasian CoE, East African Coe, and Philippines CoE
Key results
This project examined the population dynamics of coral populations at a scale which is highly novel relative
to previous studies. In addition to establishing the monitoring of coral reefs at the four Centres of Excellence
across the CRTR Program, this project delivered a number of important research outcomes and conclusions.
Outcomes included corrections developed to eliminate biases that occur because of boundary effects
when measuring the size of benthic organisms, as well as a series of relationships between 2-dimensional
and 3-dimensional estimates of coral growth. Several important ecological phenomena were also identifi ed,
including two modes of partial mortality affecting coral species in the Caribbean; with some species rapidly
losing colony integration while others maintained integration and sacrifi ced marginal tissue. Research
within this group also identifi ed the critical observation that mild thermal stress events showed different
responses than extreme events: during extreme events, small colonies do better than larger colonies, while
during mild events, colony size did not infl uence bleaching. In both cases massive corals were found to be
more sensitive than branching corals. The research within this project also identifi ed the important infl uence
of substrate refl ection, for example from sand, increasing available light and exacerbating the risk of coral
bleaching. Indeed, corals growing on and near sand showed more intense bleaching than those growing
on or near substrate with lower refl ectivity. The group also made some interesting long-term observations,
such as sea urchin densities on the western reefs of Zanzibar increasing 6 to 10-fold since 1996; with fi sh on
the same reefs increasing considerably in the last three years.
Background
The overall objective in this project was to assess coral-population dynamics within the context of coral
bleaching and subsequent effects. Given the importance of comparing between regions, in terms of the
ability to generalise about the ecological behaviour of coral reefs, the team decided to focus work around
3 CoEs in the initial stages: Puerto Morelos (Mexico), Heron Island (Australia), and Zanzibar (Tanzania). This
project also undertook activities in the Philippines and Palau. This CoE-centered approach allowed for a
focus on coral dynamics which were easily accessible, and where the research activity could evoke
collaboration among the other working groups with the Coral Reef Targeted Research Program.
We focused on quantifying both state (i.e., coral cover, macroalgal cover, size-frequency distributions) and
process (or vital-population rates) variables (including coral recruitment rates, individual growth rates,
partial mortality rates, and survival). We were also interested in the macro-processes, such as predation,
herbivory, and oceanography that infl uenced the corals' vital-population rates. Our approach allowed us to
determine which vital rates were responsible for the state of the reef, and allowed us to derive novel yet
pragmatic models that would predict population changes and the future state of the reefs.
Objectives
One of our primary goals was to understand: Which coral species were physiologically more tolerant to
thermal stresses than others, and why? Which interacting variables and processes are driving coral
population structure? Which processes are primarily responsible for coral population change?
Does differential coral population response to, and recovery from, thermal stress vary among regions and
habitats? What role do remnants play in recovery processes? Is annual recruitment vital in all habitats?
Which habitats recover more rapidly than others? Which coral species will adjust to global climate change?
Can differential and local management practices infl uence thermal-stress response and recovery?
53
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Our primary task was to assess the dynamics of coral
populations and associated coral reef organisms by
2
defi ning the key ecological processes that regulate the
populations (Figure 15). Understanding these processes,
assessing their spatial variation and their relationship with
state variables, including size-frequency distributions,
leads to predictive models of population trajectories,
relative population size distributions, and community
change under different climate change scenarios.
We predicted that size-frequency distributions coupled
with partial mortality information could provide a reliable
indicator of coral stress and provide insight into the future
of coral reefs.
Specifi cally we examined:
1.
Spatial patterns in coral population size-frequency
distributions and temporal changes of the populations
at three CoEs;
2.
Scale dependence of key process variables, including
rates of recruitment, partial mortality, and mortality;
3.
Relationships between processes and state variables
and whether size-frequency distributions refl ected
population performance;
4.
Effect of macro-processes, including herbivory
(i.e., density and composition of urchins and fi shes), on
coral population vital rates and diseases.
Figure 15. Total mortality of a coral colony over a year
period. Photo: R. van Woesik
Methods
The sampling strategy captured state and process variables at a spatial scale of 10s of kilometers (herein
called a Location). Sampling aimed at establishing 6-7 sites per location. Sites were spaced approximately
2 km apart, representing a 103 m spatial scale, with random stations nested within sites. Sites were
systematically selected based on the targeted depth
regime where sampling efforts were focused on one depth
zone (2-5 m), rather than stratifying the design by depth
and reducing the spatial area to be sampled. Stations were
randomly selected and nested within sites, representing a
104 m spatial scale and were 75 x 25 m. However, these
dimensions remain plastic depending on the reef
morphology, while maintaining a total area of 1875 m2.
Stations were the effective sampling units. Within each
station we ran at least 5, 50 m transects that were re-
randomized each sampling period, and used to estimate
state variables (i.e. size frequency distributions, benthic
composition). Three randomly selected 16 m2 quadrats
were placed in each station, and marked for relocation
purposes (Figure 16), and used to assess processes (i.e.
recruitment, growth, partial mortality, mortality etc.) across
time (repeated measures design). Both quadrats and belt-
Figure 16. Permanent quadrat in Puerto Morelos,
transects are effectively sub-samples from which we Mexico (~ 50, 1 m2 photos were overlapped to
derived estimates of means for each station at each generate a 16 m2 mosaic using Matlab® software).
sampling event (because the station was the effective Photo: Nuno Garcia
sampling unit).
54
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Results and discussion
2
a. Advancements in coral reef sampling
Throughout this project various techniques for monitoring populations have been used and tested. Zvuloni
et al. (2008) elucidated the biases that can arise in the application of popular and traditional sampling
methods (e.g. quadrat, belt-transect, and line-intercept). Simple mathematical corrections were developed
that provide unbiased estimations for previously collected data acquired by these widely used methods.
In addition, alternative sampling methods were identifi ed that do not suffer from these shortcomings.
Eliminating these types of sampling errors provide better assessments of the status of a given coral reef,
and provide precise comparisons among coral reefs in different regions. This work is equally relevant in
other ecological contexts, not just corals.
Limitations with photographic analyses have also been recognized as a 3-dimensional (3-D) reef is turned
into a 2-dimensional (2-D) photo. For some growth morphologies such as branching corals, this signifi cantly
affects growth measurements. Holmes et al. (2008) found a signifi cant difference in growth when comparing
2-D and 3-D measurements for two branching species. These fi ndings suggest that growth measurements
are only reliable when measured in 3-D, and 2-D measurements can be corrected to provide reliable coral
estimations.
b. Population dynamics
Key process variables (i.e. partial mortality, whole colony
mortality, recruitment, and growth) have been identifi ed
and investigated to some degree in each region. In the
Caribbean, partial mortality appears to be a primary
mechanism of coral-cover degradation (Figure 17).
Two modes of partial mortality were identifi ed: (1)
peripheral-partial mortality, occurring between live tissue
and substrate, and (2) centralised-partial mortality,
occurring within the colony, completely surrounded by live
tissue. All species investigated (Diploria strigosa,
Siderastrea siderea, Porites astreoides, Agaricia agaricites
and Montastraea cavernosa) were affected by peripheral
mortality, while P. astreoides and S. siderea were more
likely to also exhibit centralized mortality.
Figure 17. Partial mortality of Montastraea one year to
the next in Puerto Morelos, Mexico. Photo: J. Gilner
c. Response and recovery from bleaching events
These same process variables were investigated on Heron Island in response to a mild thermal stress event.
Mortality, recruitment, and growth were examined for four targeted coral taxa (Pocillopora damicornis,
Stylophora pistillata, Favites/Goniastrea, and Favia spp.) to determine sensitivity to a mild thermal-stress
event (in January-May 2006 on Heron Island in the Great Barrier Reef). The mild thermal stress event
showed a different response than major thermal stress events. The mild stress showed that coral-colony
size did not infl uence bleaching response, and massive corals were more affected by bleaching than
branching corals. Because massive corals were primarily surrounded by sand, it was hypothesized that
light refl ectance from sand increased incoming irradiance and hence elevated stress. During extreme
thermal-stress events small-coral colonies were least effected, as were massive and encrusting colonies.
Therefore, various thermal stress anomalies show different bleaching responses.
d. Thermal stress, bleaching, and diseases
The prevalence of black-band disease (BBD) was strongly associated with high-water temperature.
BBD infected coral colonies exhibited aggregated distributions on small spatial scales (up to 1.9 m).
Newly-infected corals appeared in proximity to existing infected corals. Previously infected corals were
more susceptible the following summer season. Therefore, water-borne infection is likely to be a signifi cant
transmission mechanism of BBD.
55
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
e. Coral-community structure
The patterns of coral community composition and diversity
2
were examined around Zanzibar at three spatial scales
ranging from transects ( 20 m), stations (< 100 m), to sites
(< 1000 m). Two sites of the four, Chumbe and Mnemba,
are located within marine protected areas (MPAs) and the
other two sites, Bawe and Changuu, are not protected.
Additive partitioning was used to examine diversity within
and between the three spatial scales, where individual-
based rarefaction was used as a null model. We show that
each of the sites is different in species composition, except
Bawe vs. Changuu. Chumbe and Mnemba, the most
diverse sites, exhibited (local) and (turnover)-diversity
as expected by random, whereas Bawe and Changuu were Figure 18. Permanent quadrat to assess coral-
different than expected. In general, given the regional community structure and herbivory by sea urchins in
Zanzibar. Photo: A. Zvuloni
species pool, diversity among sites was signifi cantly higher
than expected. These results suggest that nonrandom
processes interact on an among-sites scale (i.e., ca. kilometers), and in Bawe and Changuu they also interact
on a within - and between-transects scale. The nonrandom outcome helps identify appropriate boundaries
for studying mechanisms that generate and maintain biodiversity within this region. In considering coral
diversity in Bawe, the number of rare species and singleton species (only found in one locality) suggests
that Bawe should be declared a Marine Protected Area (MPA).
f. Macro-processes
i. Herbivory by sea urchins
We assessed the impact of sea urchin populations on coral
communities around the island of Zanzibar. Twice a year,
between 2007 and 2008, surveys of urchin populations
(species, densities and size-frequency distributions) were
performed at the same six locations used for coral and fi sh
monitoring. Urchin bioerosion experiments were conducted
separately for each of the study sites. Dominance of two
urchin species was evident: Diadema setosum and
Echinometra sp., in fi ve out of six stations, with D. setosum
dominating the western side of Zanzibar and Echinometra
sp. dominating the eastern side (Figure 19). Average
densities of D. setosom and Echinometra sp. ranged from
0-30 and 0-88 individuals m-2, respectively. Eastern sites Figure 19. Dominant sea urchins in Zanzibar.
showed 2-4 times more sea urchins than the western sites. A Echinothrix diadema, B Echinometra sp, C Diadema
savignyi and D. setosum. Photos: O. Bronstein
Urchin species assemblage did not change signifi cantly
throughout the duration of the study, nor did it change in
comparison to 1996 (McClanahan et al. 1999), whereas sea urchin densities at Changu and Chumbe
increased 6-10 fold since 1996. Mnemba showed the lowest sea urchin densities (1.2 urchins m-2) and the
highest abundance of urchin-preying fi sh. Molecular and morphological studies conducted on Echinometra
sp. from 8 locations around the island of Zanzibar and 3 locations in the northern Red Sea suggest that
urchins from the genus Echinometra are a suite of new species.
56
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
ii. Fish communities
Zanzibar's economy relies heavily on fi shes, which are used
2
both for food and as an attracting component in the coral
reef tourism industry. We studied the coral reef fi sh
community structure around Zanzibar to establish a base-
line for future monitoring of fi sh interactions with corals
and sea urchins (herbivory, predation). In April 2009 we
compared four sites around the island. Two sites are marine
reserves (Chumbe in the west side of the island and
Mnemba in the east) and another two (Changu and Bawe,
located on the west side) are not protected and are heavily
fi shed. We visually sampled fi sh in replicated 25 by 2 m
transects, identifying fi shes to the species level and
estimating their abundance and length (Figure 20). We Figure 20. The grunt fi sh Blackspotted rubberlip
used point sampling along transects to estimate habitat (Plectorhinchus gaterinus) is a component of the reef
parameters. We sampled 7046 individuals from 153 species fi sheries in Zanzibar. Photo: E. Brokovich
belonging to 30 fi sh families. Using a null model we found
that alpha diversity was lower than expected by chance but also that the sites were highly heterogeneous.
The fi sh community structure differed remarkably between the sites with the two non- managed sites being
the most similar. The fi sh-community structure was infl uenced by the amount of living coral cover, particularly
branching coral colonies and substrate structural complexity. Regardless of low coral cover, the number of
fi sh species was highest at Mnemba (a protected site). The amount of large exploitable fi sh (> 20 cm) was
highest in the protected sites (16% of all fi sh in Chumbe and 6% in Mnemba as oppose to ca. 3% in the non
protected sites). Mnemba had the highest number of sea urchin predators and the fewest sea urchins.
Comparing this study with previously reported data from the same area which was affected by the 1998
bleaching event, we show that fi sh density increased dramatically in the last three years.
57
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Key literature generated with Full/partial project support:
1.
Brokovich E, Zvuloni A, Bronstein O, Loya Y (in prep) Changes in fi sh assemblages around Zanzibar Island (Tanzania) with respect to habitat complexity and management
practices.
2.
Bronstein O, Loya Y (in prep) A new sea urchin species of the genus Echinometra from the Red Sea and western Indian Ocean.
2
3.
Bronstein O, van Woesik R, Loya Y (in prep-a) Population shifts of sea urchins on the coral reefs of Zanzibar.
4.
Bronstein O, van Woesik R, Loya Y (in prep-b) Spatial patterns of sea urchin bioerosion on the coral reefs of Zanzibar.
5.
Diaz-Pulido G, McCook LJ, Dove S, Berkelmans R, Roff G, Kline DI, Weeks S, Evans RD, Williamson DH, Hoegh-Guldberg O (2009) Doom and boom on a resilient reef:
climate change, algal overgrowth and coral recovery. PLoS ONE 4:e5239
6.
Fabricius KE, Wild C, Wolanski E, Abele D (2003) Effect of transparent exopolymer particles and muddy terrigenous sediments on the survival of hard coral recruits. Est Coast
Shelf Sci 57:613-621
7.
Field SN, Glassom D, Bythell JC (2007) Effects of artifi cial settlement plate materials and methods of deployment on the sessile epibenthic community development in a
tropical environment. Coral Reefs 26:279-289
8.
Fleitmann D, Dunbar RB, McCulloch M, Mudelsee M, Vuille M, McClanahan TR, Cole JE, Eggins S (2007) East African soil erosion recorded in a 300 year old coral colony
from Kenya. Geophysical Research Letters 34:L04401
9.
Gilner JE, Van Woesik R (in prep) Partial mortality of Caribbean corals: modes, trends and consequences. Marine Biology
10.
Gleason DF, Edmunds PJ, Gates RD (2006) Ultraviolet radiation effects on the behavior and recruitment of larvae from the reef coral Porites astreoides. Marine Biology
148:503-512
11.
Golbuu Y, Victor S, Penland L, Idip D, Emaurois C, Okaji K, Yukihira H, Iwase A, van Woesik R (2007) Palau's coral reefs show differential habitat recovery following the
1998-bleaching event. Coral Reefs 26:319-332.
12. Holem L, Koksal S, van Woesik R (in prep) Vital rates infl uencing population dynamics of Indo-Pacifi c reef corals. Oecologia
13. Holmes G (2008) Estimating three-dimensional surface areas on coral reefs. Journal of Experimental Marine Biology and Ecology 365:67-73
14.
Holmes G, Ortiz JC, Kaniewska P, Johnstone R (2008) Using three-dimensional surface area to compare the growth of two Pocilloporid coral species. Marine Biology 155:421-427
15.
Houk P, Bograd S, van Woesik R (2007) The Transition Zone Chlorophyll Front acts as a trigger for Acanthaster planci outbreaks in the Pacifi c Ocean: a historical confi rmation.
Journal of Oceanography 63:149-154
16. Houk P, van Woesik R (2008) Dynamics of shallow-water assemblages in the Saipan Lagoon. Marine Ecology Progress Series 356:39-50
17.
Hughes TP, Rodrigues MJ, Bellwood DR, Ceccarelli D, Hoegh-Guldberg O, McCook LJ, Moltschaniwskyj N, Pratchett MS, Steneck RS, Willis B (2007) Phase shifts, herbivory,
and the resilience of coral reefs to climate change. Current Biology 17:360-365
18.
Jupiter S, Roff G, Marion G, Henderson M, Schrameyer V, McCulloch M, Hoegh-Guldberg O (2008) Linkages between coral assemblages and coral proxies of terrestrial
exposure along a cross-shelf gradient on the southern Great Barrier Reef. Coral Reefs 27:887-903
19.
Kleypas, JA, and O. Hoegh-Guldberg (2007) Coral reefs and global climate change, Chapter 3 in Wilkinson, C. (ed.) Status of Caribbean Coral Reefs after Bleaching and
Hurricanes in 2005. GCRMN, Townsville.
20.
Ledlie MH, Graham NAJ, Bythell JC, Wilson SK, Jennings S, Polunin NVC, Hardcastle J (2007) Phase shifts and the role of herbivory in the resilience of coral reefs. Coral
Reefs 26:641-653
21.
Obura DO (in press) Bleaching as a life history trait in coral-zooxanthellae holobionts - relevance to acclimatization and adaptation 11th International Coral Reef Symposium,
Ft. Lauderdale, USA
22.
Ortiz JC, Gomez-Cabrera MD, Hoegh Guldberg O (submitted) Effect of colony size and surrounding substrate on corals experiencing a mild bleaching event on Heron Island
reef fl at (southern Great Barrier Reef, Australia). Coral Reefs
23.
Ortiz JC, Holmes G, Gomez-Cabrera MD, Hoegh Guldberg O, van Woesik R (in prep-a) Using population's demographic dynamics as early indicator of communities'
response to subtle stress: A coral reef case study. Ecological applications
24. Ortiz JC, van Woesik R, Hoegh-Guldberg O (in prep-b) Interpreting coral reefs evenness dynamics in a changing environment.
25.
Ortiz JC, van Woesik R, Marshall D, Hoegh-Guldberg O (in prep-c) `The balance between how much we should do and How much we can do: Maximizing the power and
accuracy of a monitoring program dataset'.
26. Ridgway T, Gates RD (2006) Why are there so few genetic markers available for coral population analyses? Symbiosis 41:1-7
27.
Ridgway T, Riginos C, Davis J, Hoegh-Guldberg O (2008) Genetic connectivity patterns of Pocillopora verrucosa in southern African Marine Protected Areas. Marine Ecology
Progress Series 354:161-168
28.
Rongo T, Bush M, van Woesik R (2009) Voyages of discovery or necessity: harmful algal blooms cause ciguatera poisoning in fi shes and contribute to the contemporary and
late Holocene Polynesian migrations. Journal of Biogeography doi:10.1111/j.1365-2699.2009.02139.x
29. Rosenberg E, Kushmaro A, Kramarsky-Winter E, Banin H, Loya Y (in press) Role of microorganisms in coral bleaching. Environmental Microbiology
30. Rosenfeld M, Shemesh A, Yam R, Sakai K, Loya Y (2006) Impact of the 1998 bleaching event on Ð18O records of Okinawa corals. Marine Ecology Progress Series 314:127-133
31. Rusch A, Huettel M, Wild C, Reimers CE (2006) Benthic oxygen consumption and organic matter turnover in organic-poor, permeable shelf sands. Aqu Geochem
32. van Woesik R, Ganase A, Sakai K, Loya Y (in prep) Coral bleaching: the winners and the losers, ten years on. Ecology Letters
33.
van Woesik R, Koksal S (2006) A coral population response (CPR) model for thermal stress. In: Phinney J.T. et al (ed) Coral reefs and climate change: science and management.
American Geophysical Union, Washington DC, p 129-144
34. van Woesik R, Lacharmoise F, Koksal S (2006) Annual cycles of solar insolation predict spawning times of Caribbean corals. Ecology Letters 9:390-398
35.
Wagner D, Mielbrecht E, van Woesik R, (2008) Application of landscape ecology to spatio-temporal variance of water-quality parameters along the Florida Keys reef tract.
Bulletion of Marine Science 83:553-569
36.
Weeks SJ, Anthony KRN, Bakun A, Feldman GC, Hoegh-Guldberg O (2008) Improved predictions of coral bleaching using seasonal baselines and higher spatial resolution.
Limnology and Oceanography 53:1369-1375
37.
Wehrmann LM, J. KN, Pirlet H, Unnithan V, Wild C, Ferdelman TG (2009) Carbon mineralization and carbonate preservation in modern cold-water coral reef sediments on
the Norwegian shelf. Biogeosciences 6:663-680
38.
Yarden O, Ainsworth TD, Roff G, Leggat W, Fine M, Hoegh-Guldberg O (2007) Increased prevalence of ubiquitous ascomycetes in an acropoid coral (Acropora formosa)
exhibiting symptoms of brown band syndrome and skeletal eroding band disease. Applied and Environmetal Microbiology 73:2755-2757
39.
Zvuloni A, Armoza-Zvuloni R, Loya Y (2008a) Structural deformation of branching corals associated with the vermetid gastropod Dendropoma maxima. Marine Ecology
Progress Series 363:103108
40.
Zvuloni A, Artzy-Randrup Y, Stone L, Kramarsky-Winter E, Barkan. R, Loya Y (2009) Spatio-temporal transmission patterns of black-band disease (BBD) in a coral community.
PLoS ONE 4 e4993
41. Zvuloni A, Artzy-Randrup Y, Stone L, Loya Y (in prep-a) Spatio-temporal relations between two coral diseases: black-band and white plague-like.
42.
Zvuloni A, Artzy-Randrup Y, Stone L, van Woesik R, Loya Y (2008b) Ecological size-frequency distributions: how to prevent and correct biases in spatial sampling. Limnology
and Oceanography: Methods:144-153
43. Zvuloni A, Brokovich E, Hosgin I, van Woesik R, Loya Y (in prep-b) Porites micro-atolls are diversity hot spots.
44.
Zvuloni A, Mokady O, Al-Zibdah M, Bernardi G, Gaines SD, Abelson A (2008c) Local scale genetic structure in coral populations: A signature of selection. Marine Pollution
Bulletin 56:430-438
45. Zvuloni A, Stone L, Loya Y (in prep-c) Obtaining ecological count-based measures of sessile organism distributions from line-intercept data.
46. Zvuloni A, van Woesik R (in prep) Spatial patterns of coral diversity around Zanzibar Island.
58
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Project 7. Effects of bleaching on coral and fi sh communities in
the Western Indian Ocean and effects of bleaching on coastal coral
2
communities in East Africa
Mebrahtu Ateweberhan, Juliet Karisa, Tim R. McClanahan, David Obura, and Shakil Visram
Location: Kenya and East African CoE
Key results
The study within this project compiled ~2000 site-time combinations of coral cover for the whole Western
Indian Ocean (WIO) for the period 1958-2005 and analyzed regional patterns and identifi ed the 1998
climatic oscillation as the most signifi cant factor in affecting regional variation in coral cover. Further analysis
of change in coral cover and community structure and their relationship with environmental properties
indicated that the impact of the disturbance was variable in space in association with region-specifi c
environmental properties; primarily the background temperature, light condition and water current.
This has been mapped and provides the basis for identifying least/most vulnerable reefs and predicting the
spatial distribution of future coral reefs and developing management priorities that are most appropriate
for their future. The coral recruitment study in Kenya indicated higher recruit density and generic composition
in Mombasa (MPA) than in fi shed reefs.
Background
The Western Indian Ocean (WIO) is home to millions of
coastal people who directly or indirectly depend on coral
reefs for goods and services (Figure 21). Many coral reefs
in the region are already under excessive pressure from the
effects of overfi shing, coastal development and pollution.
Climate change will interact and probably reinforce the
negative effect of these other stress factors. The region
suffered one of the highest rates of coral mortality during
the 1998 climatic oscillation (Wilkinson et al. 1999; Goreau
et al. 2000).
The future of corals and coral reefs in the region and
globally will depend on their vulnerability to environmental
changes associated with climate change. This will be
infl uenced by the background environmental conditions Figure 21. Fishermen in Mtwara, Tanzania.
and community structure that will eventually affect their Photo: T. McClanahan
tolerance to extreme anomalous events, their ability to recover from the impacts and their overall resilience.
A better understanding of the relationship between the regional environmental change and the background
environmental properties and the status in coral reef community structure is required. Recent studies in the
Caribbean (Gardner et al. 2003) and the Pacifi c and Eastern Indian Ocean regions (Bruno and Selig 2007)
indicated signifi cant long-term region-wide changes in coral cover because of many interacting stress
factors. This leaves a gap in information for understanding the global patterns; particularly the WIO region,
which remains one of the main reef regions where little is known about the timing, rate and spatial variability
of change in coral cover.
East African reef systems are among the most poorly studied on a regional scale yet face some of the
greatest environmental threats globally. Measuring recruitment patterns and mortality of corals is important
for understanding mechanisms that regulate their populations and mediate species coexistence. The East
African project focuses on ecological and eco-physiological aspects of coral bleaching biology, and aspects
of symbiotic biology and Symbiodinium dynamics.
59
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Objectives
·
Compile coral cover from published and unpublished sources and conduct a meta-analysis of regional
2
patterns.
·
Investigate the relationship of the regional change in cover with environmental properties, and sea
surface temperature in particular.
·
Gather additional information in coral and other benthic community structure and investigate changes
in relation to the effects of the 1998 ENSO and other minor bleaching events.
· Investigate the effect of the changes in benthic structure and reef fi sh populations and vice versa.
·
Identify reefs of high/low environmental vulnerability to future climate change scenarios and for
prioritising conservation, based on their environmental properties and community responses.
·
Investigate coral and zooxanthellae population dynamics and responses in physiology related to
management, seasonality and depth.
Materials and methods
a.
Regional patterns in coral cover, community
structure and species diversity
We compiled a cover database based on published and
unpublished data for ~2000 site-time combinations
gathered between 1958 and 2005. We constructed box
plots and compared cover distributions between time
periods for the whole WIO and between regions for three
time periods, some time before 1998 (1985-1997),
immediately after the 1998 event (1999-2000) and the
recovery period (2001-2005). We calculated relative
change in coral cover for 36 major reef areas in WIO for
periods immediately before and after 1998 in order to
compare regional variation in the impacts of the 1998
bleaching event. Coral species richness data was compiled Figure 22. Partially bleached colony of Porites lutea
for the whole region by including recent taxonomic surveys in the WIO during 2005 bleaching event.
that focused on the southern part of WIO (Tanzania, Photo: T. McClanahan
Mozambique, Madagascar) and the Southern Red Sea
(Eritrea) that were less surveyed previously. Coral community structure was investigated for 8 countries
and 91 sites for data gathered in 2005 when a minor bleaching event was observed in the southern part of
WIO (Figure 22). Similar analysis had been conducted for Kenya and NE Madagascar (1998) and the
Maldives (2000) which enabled comparison between the two periods for those areas. The quick survey also
enabled analysis of taxon and site-specifi c susceptibilities based on the number of coral colonies, sites and
bleaching response.
b. Changes in size structure of coral populations on Kenyan reefs
The interactive effect of management and bleaching on the size structure of coral population was analysed
by comparing haphazard colony size measurements for 21,000 of 26 common coral taxa collected annually
between 1992 and 2006 on Kenyan reef lagoons of different management levels.
c. Relationship between coral cover, thermal stress and the background SST properties
The relationship between the level of thermal stress, expressed in degree heating weeks/months (number
of weeks/months that the temperature is 1 °C above the warm-season baseline), experienced in 1998 and
the background SST properties was investigated for 40 HADISST cells in the East African Coastal Current
System (McClanahan et al. 2007a). A similar analysis was made for the 36 major reef areas in the region
where change in coral cover due to the 1998 thermal stress was analysed. The latter analysis included areas
in the Red Sea and Arabian regions. In addition, the predictive ability of a multivariate stress model (Maina
et al. 2008) that included 11 SST and other environmental properties was investigated.
60
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
d. Change in benthic reef structure and reef fi sh populations
Changes in reef fi sh populations belonging to different size classes and trophic composition in relation to
2
the change in reef benthic structure and topographic complexity was investigated on reefs in several
countries in the region by comparing fi sh community structure before and after 1998. In addition, the role
of management in infl uencing the response to bleaching was studied by comparing MPAs and fi shed reefs.
e. Spatial-temporal patterns in coral recruitment and mortality and zooxanthellae density
The East African project studied spatial and temporal patterns of coral recruitment and mortality in four
lagoonal reefs in Kenya with the aim of comparing coral recruit densities and juvenile mortality between
sites, months, seasons and years. In addition, differences in zooxanthellae densities among coral taxa were
compared for the four main seasons in East Africa (NE Monsoon, Dec-Mar; SW Monsoon, Apr-Oct, and the
transitional seasons in between, Nov-Dec).
Results and discussion
a.
Regional change in coral cover, community structure
and species richness distribution
Investigations of the spatio-temporal patterns indicated
that the 1998 climatic oscillation was the single most
important factor in infl uencing temporal change in coral
cover in WIO (Ateweberhan and McClanahan in review-b).
It resulted in a `stepped change' of a strong decline in
1999-2000 and recovery in 2001-2005 unlike in the
Caribbean (Gardner et al. 2003) and the Eastern Indian
Ocean-Western Pacifi c (Bruno and Selig 2007), where
continuous declines have been observed even before
1998. Analysis of frequency distributions indicated that Figure 23. Branching coral Acropora sp. in Kenyan
median coral cover was 38.8% before 1998, 18.13% reefs. Photo: T. McClanahan
immediately after the 1998 ENSO and 28.13% in 2001-
2005. The most severely affected reef areas were southern India, Sri Lanka, central atolls of the Maldives
and Granite Seychelles. Northern Arabian/Persian Gulf, Gulf of Oman, Chagos, Kenya, southern Tanzania
and southern Seychelles were also greatly affected. Southern Arabian/Persian Gulf, Arabian Sea (Socotra
and Gulf of Kutch), southern Maldives, northern Tanzania, northern and central Mozambique and Aldabra
suffered moderate effects. The Red Sea, Mayotte, Comoros, southern Mozambique, South Africa,
Madagascar, Reunion, Mauritius, and Rodrigues were the least affected.
The study on coral communities and diversity in the WIO found evidence that most of the northern Indian
Ocean communities were considerably changed from the pre-1998 communities (McClanahan et al. 2007b).
These reefs, previously dominated by branching and plating species, such as Acropora (Figure 23) and
Montipora, are now dominated by massive and submassive corals, such as Porites and faviids. In contrast,
the southern Indian Ocean community has more of the branching forms. The same study also calculated
extinction probabilities of coral taxa in the region by incorporating information on geographic distribution,
abundance and bleaching susceptibility. Some of the rare and bleaching-susceptible taxa, such as Plerogyra,
Plesiastrea, Gyrosmillia, Physogyra and Seriatopora, were predicted to be more vulnerable to local
extinction while some of the sensitive taxa such as Montipora, Acropora, and Pocillopora are widely
distributed and likely to persist over climate change disturbances, although they could suffer localised
population declines.
A scatter plot of diversity-mortality relationship (Figure 24) can be used to show which areas of high diversity
are the most susceptible and which are not (Ateweberhan and McClanahan in review-a). North-western
Australia; Gulf of Oman; southern Kenya; Mafi a and Mnazi Bay in Tanzania; Lakshadweep, India, Sri Lanka;
Maldives; Seychelles and Chagos were areas of high diversity that suffered high mortality in 1998. High
diversity areas that had lower mortality were northwestern Madagascar; Thailand-Mergui;
Mayotte;Mozambique; Rodrigues; Socotra; Songo Songo, central Tanzania; southern Red Sea; Zanzibar
and northern Tanzania. If the 1998 event represented vulnerability in the region then we can expect that
these patterns may repeat themselves in the future and that the high diversity-low mortality sites listed
above are a priority for protective management.
61
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Figure 24. Scatterplot of coral diversity-mortality
1.0
20
4
relationship in the western Indian Ocean.
Values are standardized from 0 to 1 relative to the lowest and
38
2
highest values. High and low areas are separated at a
0.8
40
41
22
conventional 50% cut level (dashed lines). Sites are 1. Aldabra,
34
Cosmoledo, Faarquhar, 2. Arabian Gulf, 3. Arabian Sea, 4.
27
7
39
18
Australia NW, 5. Australia SW, 6. Bangladesh, 7. Chagos, 8. Cocos
0.6
30
1
33
Keeling, 9. Comoros, 10. Djibouti (Gulf of Aden), 11. Gulf of
24
15
42
37
Oman, 12. India (Andaman-Nicobar), 13. India (Gulf of Kutch), 14.
19
India (Gulf of Manar), 15. India (Lakshadweep), 16. India (West
11
coast patches), 17. Kenya- N, 18, Kenya- S, 19. Madagascar- NE,
A
32
No. of species 0.4
20. Madagascar- NW, 21. Madagascar- SW, 22. Maldives, 23.
14
Mauritius, 24. Mayotte, 25. Mozambique S (Pemba), 26. Myanmar
3
(Burma), 27. Red Sea- C, 28. Red Sea- N, 29. Red Sea- S, 30.
0.2
9
Reunion, 31. Rodrigues, 32. Seychelles, 33. Socotra, 34. Somalia,
26
17
35. South Africa, 36. Sri Lanka, 37. Tanzania- C (Mafi a), 38.
2
6
Tanzania- C (Songo Songo), 39. Tanzania- N (Zanzibar), 40.
35
0.0
13
Tanzania- S (Mnazi Bay), 41. Thailand-Mergui Archipelago. When a
number is not shown it is in the circle marked A.
0.0
0.2
0.4
0.6
0.8
1.0
Relative change in coral cover
b. Relationship between change in coral cover community structure and environmental properties
Analysis of the relationship between seawater temperature properties and coral mortality identifi ed areas
with fl at and weak bimodal SST distributions and moderate SD SSTs as the most resistant to these large-
scale disturbances (Ateweberhan and McClanahan in review-b). These are mostly situated in high retention
areas (e.g. the triangle between southern Tanzania, northern Mozambique, and northern Madagascar), or
on leeward sides of islands (e.g. inner Zanzibar) and the subtropics (e.g. South Africa and northern Red
Sea). The relative abundance of Acropora and Montipora declined in direct proportion to the cumulative
warm seawater temperature experienced in 1998 (Figure 25).
The multivariate stress model also predicted the change in cover and community susceptibility to bleaching
reasonably well (Maina et al. 2008). Mean and maximum historical temperatures and degree heating weeks
appear to be the main temperature variables that are positively associated with bleaching severity, whereas
temperature variation (CV) was negatively associated with the bleaching severity. Photosynthetically active
(PAR) and ultraviolet (UV) light are positively associated with bleaching severity. Winds and currents seem
to play some role and the analysis indicates that bleaching is most severe in areas with low winds and north-
south currents.
From both analyses of the background SST and the multivariate stress model, it is clear that the thermal
stress of 1998 and its impact on coral cover and community structure were reliably predictable and that the
background SST and environmental properties infl uence the outcome of a bleaching event. Both models
provide a working tool to plan appropriate management responses for each of these regions (e.g.
(McClanahan et al. 2008b).
30
Cluster
12
20
Acropora
Montipora
Porites massive
25
1
R2 = 0.82
10
R2 = 0.77
R2 = 0.54
F = 27.6
F = 19.99
F = 6.98
2
15
20
p = 0.002
8
p = 0.004
p = 0.038
3
15
4
6
10
5
10
Abundance (%)
6
4
Abundance (%)
Abundance (%)
5
5
7
2
8
0
0
0
0
2
4
6
8
10
DHW-98
DHW-98
DHW-98
Figure 25. Relative abundance as a function of degree heating weeks in 1998 (DHW-98) for the 3 taxa with statistically signifi cant
(p < 0.05) linear relationships. JCOMM DHW was used as it gave a better fi t than NOAA DHW in a previous analysis. Clusters
defi ned as in Fig. 1. McClanahan et al. (2007a)
62
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
c. Changes in size structure of coral populations on Kenyan reefs
Analysis of size structure of coral populations also showed signifi cant interactions between bleaching and
2
management effects (McClanahan et al. 2008a). Seventeen taxa had statistically signifi cant different sizes
for comparison of the management regimes, with only one genus, Pavona, having larger sizes in the
unprotected reefs. The size of eight coral genera showed signifi cant time and management interactions,
and size frequency differences that existed in management areas prior to 1998 were further reinforced after
the bleaching event. Time alone was a signifi cant factor for eleven genera, and in all cases colonies were
smaller after 1998. Most taxa had right skewed size frequency distributions and these were signifi cantly
reduced after 1998 for Acropora, Hydnophora, and Montipora. Most taxa had peaky distributions and only
Acropora experienced a statistically signifi cant change from peaky to fl at across the 1998 event. Generally,
no taxa were tolerant to both fi shing and bleaching disturbances and the combined effect was to reduce
the size of all corals.
d. Relationship between change in benthic reef
structure and reef fi sh populations
There was signifi cant shift in the species composition of
reef fi shes in relation to the change in coral cover, coral
and benthic community structure and spatial complexity
(Graham et al. 2008). Generally corallivore and planktivore
fi shes suffered the highest population declines with local
extinctions in some species. Effects also varied by size, the
smallest size class suffering the highest (Figure 26).
Herbivorous and carnivorous fi shes and mixed feeders
didn't show signifi cant effects but long-term responses
could be signifi cant because of the impact on the small-
size classes (recruits and juveniles). Responses also varied
in accordance with management; generally protected
areas suffered higher population declines and species
losses. Protected areas also suffered the highest coral
mortality and recovery was slower compared with fi shed Figure 26. Amphiprion on bleached anemone in
reefs (McClanahan 2008).
Maldives, Indian Ocean Photo: T. McClanahan
e. Spatial-temporal variation in coral recruitment and mortality in coastal Kenya
Coral recruit density in the Mombasa Marine Park was signifi cantly higher (7.45 recruits m-2) than in the
fi shed reefs. Recruit density was higher during the cold period (Southeast Monsoon) than the warm season
(Northeast Monsoon) during the two study years, with 2006 having higher recruitment than 2007. A total
of 16 genera were recorded; Mombasa Marine Park had the highest number of genera (13) while Kanamai
had the lowest density (3.52 recruits m-2) and number of genera (8). Dominating genera, in order of overall
abundance were Favia, Porites, Favites, Pocillopora and Pavona, respectively. Coral genera exhibited site
specifi c abundance and mortality rates with Pocillopora having high abundance in Nyali (3.46 recruits m-2)
and high mortality rate in Vipingo (85%). The spatial and temporal variation in recruit density, genera
richness and survival of coral genera is probably related to management and sea-water temperature.
f. Temporal dynamics and species-specifi c differences in zooxanthellae densities
Zooxanthellae densities and mitotic index were variable depending on the coral taxa investigated
(Grimsditch et al. 2008b). Pocillopora damicornis had the lowest zooxanthellae density and the highest
taxonomic index compared to Galaxea fascicularis, Porites cylindrica and Porites lutea that had high
zooxanthellae densities but low mitotic index. The results are in agreement with previous observations that
showed inverse correlation between zooxanthellae density and bleaching susceptibility (Stimson et al.
2002). All the studied coral taxa displayed highest zooxanthellae densities during the northeast monsoon
season and most displayed highest mitotic indices during the transitional period directly preceding the
northeast monsoon (Grimsditch et al. 2008a). The higher densities found during the northeast monsoon
(when temperatures and radiation levels are higher) are opposite to trends observed at higher latitudes,
indicating that corals closer to the equator may be less infl uenced by seasonal variability of temperature
and light. Other factors may have a greater infl uence on population dynamics.
63
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 2: Organismal mechanisms to ecological outcomes
Key literature generated with full/partial project support:
1.
Cinner JE, Daw TM, McClanahan TR (in press) Poverty and livelihood portfolios affect decisions to exit a declining artisanal fi shery. Conservation Biology
2.
Cinner JE, McClanahan TR, Graham NAJ, Pratchett MS, Wilson SK, Raina JB (2009) Gear-based fi sheries management as a potential adaptive response to climate change
2
and coral mortality. Journal of Applied Ecology 46:724-732
3.
Graham NA, McClanahan TR, MacNeil MA, Wilson SK, Polunin NV, Jennings S, Chabanet P, Clark S, Spalding MD, Letourneur Y, Bigot L, Galzin R, Ohman MC, Garpe KC,
Edwards AJ, Sheppard CR (2008) Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems. PLoS ONE 3:e3039
4.
Graham NAJ, McClanahan TR, Letourneur Y, Galzin R (2007) Anthropogenic stressors, inter-specifi c competition and ENSO effects on a Mauritian coral reef. Environmental
biology of fi shes 78:57-69
5.
Grimsditch G, Awaura J, Kilonzo J, Amiyo N, Obura D (2008a) High zooxanthellae densities and turnover correlate with low bleaching tolerance in Kenyan corals. In: Obura
D, Tamelander J, Linden O (eds) Ten years after bleaching - facing the consequences of climate change in the Indian Ocean. CORDIO status report 2008. CORDIO/Sida-
SAREC, Mombasa, p 235-236
6.
Grimsditch G, Awaura J, Kilonzo J, Amiyo N, Obura D (2008b) Zooxanthellae densities are highest in summer months in equatorial corals in Kenya. In: Obura D, Tamelander
J, Linden O (eds) Ten years after bleaching - facing the consequences of climate change in the Indian Ocean. CORDIO status report 2008. CORDIO/Sida-SAREC, Mombasa,
p 237-239
7.
Karisa JF, Kaunda-Arara B, Obura D (2008) Spatio-temporal variation in coral recruitment and mortality in coastal Kenya. In: Obura D, Tamelander J, Linden O (eds) Ten years
after bleaching - facing the consequences of climate change in the Indian Ocean. CORDIO status report 2008. CORDIO/Sida-SAREC, Mombasa
8.
Maina J, McClanahan TR, Venus V (2008a) Meso-scale modelling of coral's susceptibility to environmental stress using remotely sensed data: Reply to comments by Dunne
2008. Ecological Modelling 218:192-194
9.
Maina J, Venus V, McClanahan TR, Ateweberhan M (2008b) Modelling susceptibility of coral reefs to environmental stress using remote sensing data and GIS models.
Ecological Modelling 212:180-199
10.
McClanahan T, Ateweberhan M, Omukoto J (2008a) Long-term changes in coral colony size distributions on Kenyan reefs under different management regimes and across
the 1998 bleaching event. Marine Biology 153:755-768
11.
McClanahan TR, Ateweberhan M, Graham NAJ, Wilson SK, Sebastian CR, Guillaume MMM, Bruggemann JH (2007a) Western Indian Ocean coral communities: bleaching
responses and susceptibility to extinction. Marine Ecology Progress Series 337:1-13
12.
McClanahan TR, Ateweberhan M, Muhando CA, Maina J, Mohammed MS (2007b) Effects of climate and seawater temperature variation on coral bleaching and mortality.
Ecological Monographs 77:503-525
13.
McClanahan TR, Ateweberhan M, Omukoto J, Pearson L (2009a) Recent seawater temperature histories, status, and predictions for Madagascar's coral reefs. Marine Ecology
Progress Series 380:117-128
14.
McClanahan TR, Ateweberhan M, Ruiz Sebastian C, Graham NAJ, Wilson SK, Bruggemann JH, Guillaume MMM (2007c) Predictability of coral bleaching from synoptic
satellite and in situ temperature observations. Coral Reefs 26:695-701
15.
McClanahan TR, Carreiro-Silva M, DiLorenzo M (2007d) Effect of nitrogen, phosphorous, and their interaction on coral reef algal succession in Glover's Reef, Belize. Marine
Pollution Bulletin 54:1947-1957
16.
McClanahan TR, Graham NAJ, Maina J, Chabanet P, Bruggemann JH, Polunin NVC (2007f) Infl uence of instantaneous variation on estimates of coral reef fi sh populations
and communities. Marine Ecology Progress Series 340:221-234
17.
McClanahan TR, Hicks CC, Darling ES (in press-a) Fishing pressure, productivity, and competition for resources: Malthusian overexplotation and efforts to overcome it on
Kenyancoral reefs. Ecological Applications
18.
McClanahan TR, Weil E, Cortés J, Baird AH, Ateweberhan M (2009c) Consequences of coral bleaching for sessile reef organisms. In: van Oppen MJH, Lough JM (eds) Coral
bleaching: patterns, processes, causes and consequences Ecological Studies: analysis and synthesis 205. Springer Verlag Berlin, Germany, p 121-138
19.
McClanahan TR, Weil E, Maina J (2009d) Strong relationship between coral bleaching and growth anomalies in massive Porites. Global Change Biology
10.1111/j.1365-2486.2008.01799.x
20.
McCook LJ, Folke C, Hughes TP, Nystrom M, Obura DO, Salm R (2007) Ecological resilience, climate change and the Great Barrier Reef: an introduction. In: Johnson J,
Marshall P (eds) Climate change and the Great Barrier Reef A Vulnerability Assessment GBRMPA. Great Barrier Reef Marine Park Authority and Australian Greenhouse Offi ce,
Australia
21. Obura DO (2005) Resilience and climate change - lessons from coral reefs and bleaching in the Western Indian Ocean. Estuar Coast Shelf Sci 603:353-372
22.
Pratchett MS, Munday PL, Wilson SK, Graham NAJ, Cinner JE, Bellwood DR (2008) Effects of climate-induced coral bleaching on coral reef fi shes: ecological adn economic
consequences. Oceanography and Marine Biology: An Annual Review 46:251-296
23.
van Woesik R, Nakamura T, Yamasaki H, Sheppard CR (2005) Comment on ` Effects of geography, taxa, water fl ow, and temperature variation on coral bleaching intensity in
Mauritius' (McClanahan et al 2005) Marine Ecology Progress Series 305:297-299
24.
Vezina AF, Hoegh-Guldberg O (2008) Effects of ocean acidifi cation on marine ecosystems Introduction. Marine Ecology-Progress Series 373:199-201
25.
Visram S, Douglas AE (2007) Resilience and acclimation to bleaching stressors in the scleractinian coral Porites cylindrica. Journal of Experimental Marine Biology and
Ecology 349:35-44
26.
Visram S, Mwaura J, Obura DO (2007) Assessing coral community recovery from coral bleaching by recruitment in two reserves in Kenya. Western Indian Ocean Journal of
Marine Science 6:199-205
64
3
Theme 3
Biomarkers of stress
65
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 3: Biomarkers of stress
Project 8. Biochemical stress markers in corals and Symbiodinium
3
Mayfi eld Anderson, Sophie Dove, Ruth Gates, Ove Hoegh-Guldberg, Paulina Kaneiwska, Michael Lesser,
William Leggat, Oren Levy, Mauricio Rodriguez-Lanetty, and Caroline Palmer
Locations: Mesoamerican CoE and Australasian CoE
Key results
Developing a better understanding of the stress physiology of corals and Symbiodinium leads to the
possibility of developing indicator tools for detecting the rates and origin of stress on reef-building corals.
Building on the results of projects 1, 5 and 8, the BWG project identifi ed potential biochemical markers for
use in monitoring stress. A range of techniques were used including microarrays developed as part of the
BWG project. Host pigments such as gfp-like proteins such as pocilloporin show distinct visual correlations
with stress and were explored as a potential marker of both heat stress and physical damage. In the case
of heat stress, pocilloporin concentrations decreased dramatically and showed a negative correlation
between heat stress and their expression. Red fl uorescent versions of pocilloporin were up-regulated in
trematode-infected coral tissues indicating a potential diversity of complex responses. Exploration of
markers associated with osmoregulation in endosymbiosis revealed a series of potentially useful biochemical
markers. Lastly, a large-scale microarray project was undertaken to identify potential markers associated
with light stress, given its importance in coral bleaching.
Background
Understanding and monitoring the development of physiological stress is a key aspect of understanding
global change and its impacts on coral reefs. Until very recently, the number of biochemical markers for
stress was extremely limited. Given this, the BWG pursued Project 8 with the objective of expanding the
number of tools available to scientists working in the four Centres of Excellence. This led to the use of
newly developed microarray technology. Developed around several thousand Acropora millepora
Expression Sequence Tags (EST), this technology shows enormous promise for tracking and developing
potential markers of stress.
Materials and methods
In this study, we examined the direct effect of elevated
temperatures on the invertebrate host exploring the early
transcriptional response of aposymbiotic (without algal
symbionts) coral larvae. We explored relative changes in
transcription using a cDNA microarray constructed for the
scleractinian coral, Acropora millepora, and containing
18,000 EST clones / 8,386 unigenes. Our study identifi ed 32
genes that were signifi cantly up- and down-regulated when
coral larvae were exposed to elevated temperatures. Down-
regulation of several key components of DNA/RNA
metabolism was detected implying inhibition of general
cellular processes. The down-regulation of protein synthesis,
however, was not simple and random, which suggested that
the stress response was a more complicated adjustment of
cellular metabolism. We identifi ed four signifi cant outcomes
during the very early hours of the transcriptional response to
hyperthermal stress in coral larvae. First, the expression of
heat shock proteins increased rapidly (within 3 hours) in
response to hyperthermal stress. Secondly, a fl uorescent
protein homolog, DsRed-type FP, decreased its expression Figure 27. The bright colours of reef building corals are
in response to elevated temperature reinforcing a potential due to gfp-like compounds called pocilloporins fi rst
identifi ed by Dove et al. (2001). These particular
role as a molecular marker for monitoring hyperthermal compounds show promise as biomarkers of heat and
stress in nature. Thirdly, the down-regulation of a coral light stress, as well as damage due to parasites.
66
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 3: Biomarkers of stress
mannose-binding lectin under hyperthermal stress suggests that heat stress might compromise some
components of the coral-immune defence and therefore might bring about susceptibility to pathogenic
3
diseases. And lastly, genes involved in protecting cells against oxidative stress showed little response to
heat stress, supporting the proposal that up-regulation of cnidarian host oxidative stress genes may require
Reactive Oxygen Species (ROS) generated by stressed algal symbionts.
The role of pocilloporin as a host-specifi c biomarker of heat stress has been explored in adult corals as well.
Differential display reverse transcription polymerase chain reaction (DDRT-PCR) was used to produce
fi ngerprints of gene expression for adult reef-building corals (A. millepora) exposed to 33 degrees C.
Changes in the expression of 23 out of 399 putative genes occurred within 144 h (Smith-Keune and Dove
2008). Down-regulation of one host-specifi c gene (AmA1a) occurred within just 6 h. Full-length sequencing
revealed the product of this gene to be an all-protein chromatophore (green fl uorescent protein [GFP]-
homolog). RT-PCR revealed consistent down-regulation of this GFP-homolog for three replicate colonies
within 6 h at both 32 degrees C and 33 degrees C but not at lower temperatures. Down-regulation of this
host gene preceded signifi cant decreases in the photosynthetic activity of photosystem II (dark-adapted
Fv/Fm) of algal symbionts as measured by PAM fl uorometry. Gene expression of host-specifi c genes such
as GFP-homologs may therefore prove to be highly sensitive indicators for the onset of thermal stress
within host coral cells. The physiology of pocilloporin within the stress biology of corals was also explored
in two major studies by the BWG (Dove et al. 2006; Dove et al. 2008). These studies revealed a complex
set of relationships between pigmentation, photosynthetic dysfunction and thermal stress.
Other groups within the BWG program explored the changes in expression of fl uorescent proteins as a
function of damage. The Pauley Program workshop run as part of the BWG activities in 2007 led to the
investigation of how the Hawaiian coral species, Porites compressa, responds biochemically to being
heavily infected with a larval trematode. In this particular case, visual signs (i.e. distinct pink nodules of
tissue) are associated with infection by the trematode. This study documented up-regulation of red
fl uorescent compounds in trematode-infected tissue compared to healthy tissue. Additionally, the
aggregations of melanin-containing granular cells observed in the trematode-infected tissue, had been
previously described as an indicator of an infl ammation-like response of coral, confi rming the presence of
an immune response to the larval trematode.
Figure 28. Output from a study in which coral larvae
(Acropora millepora) were exposed to three different
temperatures over periods extending from hours to days
(Rodriquez-Lanetty et al. 2009). Each bar represents an
individual type of protein. Those expressed in blue
indicate a decrease in expression, while those in red
have been a regulator relative to controls. Proteins
appearing in yellow have not changed.
67
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 3: Biomarkers of stress
Key literature generated with full/partial project support:
1.
Dove S, Ortiz JC, Enriquez S, Fine M, Fisher P, Iglesias-Prieto R, Thornhill D, Hoegh-Guldberg O (2006) Response of holosymbiont pigments from the scleractinian coral
Montipora monasteriata to short-term heat stress. Limnology and Oceanography. 2006; 51 (2): 1149-1158
3
2.
Dove SG, Lovell C, Fine M, Deckenback J, Hoegh-Guldberg O, Iglesias-Prieto R, Anthony KR (2008) Host pigments: potential facilitators of photosynthesis in coral symbioses.
Plant Cell Environ 31(11):1523-33
3.
Levy O, Appelbaum L, Leggat W, Gothlif Y, Hayward DC, Miller DJ, Hoegh-Guldberg O (2007) Light-responsive cryptochromes from a simple multicellular animal, the coral
Acropora millepora. Science 318:467-470
4.
Mayfi eld AB, Gates RD (2007) Osmoregulation and osmotic stress in coral dinofl agellate symbiosis: Role in coral bleaching. Comparative Biochemistry and Physiology,
Part A 147:1-10
5.
Maynfi eld AB, Hirst MB, Gates RD (2009) Gene expression normalization in a dual-compartment system: a real-time quantitative polymerase chain reaction protocol for
symbiotic anthozoans. Molecular Ecology Resources 9:462-470
6.
Palmer CV, Roth MS, Gates RD (2009) Red fl uorescent protein responsible for pigmentation in trematode-Infected Porites compressa tissues. The Biological Bulletin 216:68-74
7.
Reynolds JM, Bruns BU, Fitt WK, Schmidt GW (2008) Enhanced photoprotection pathways in symbiotic dinofl agellates of shallow-water corals and other cnidarians.
Proceedings of the National Academy of Sciences USA 105:13674-13678
8.
Rodriguez-Lanetty M, Phillips WS, Dove S, Hoegh-Guldberg O, Weis VM (2008) Analytical approach for selecting normalizing genes from a cDNA microarray platform to be
used in q-RT-PCR assays: A cnidarian case study. Journal of Biochemical and Biophysical Methods 70:985-991
9.
Rodriguez-Lanetty M, Harii S, Hoegh-Guldberg O (2009) Early molecular responses of coral larvae to hyperthermal stress. Molecular Ecology (in review).
10.
Smith-Keune C, Dove S (2008 ) Gene expression of a green fl uorescent protein homolog as a host-specifi c biomarker of heat stress within a reef-building coral. Mar
Biotechnol 10:166-180
68
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 3: Biomarkers of stress
Project 9. Production of colour card tool to detect and
monitor coral bleaching
3
U. E. Siebeck, N. J. Marshall, A. Klüter and Ove Hoegh-Guldberg
Location: Developed at the Australasian CoE in association with University of Queensland-based researchers.
Key results
This project aimed to develop a rapid yet reliable technique for assessing changes in colour of reef-building
corals. Initial discussions between BWG members and vision researcher, Professor Justin Marshall, revealed
the viability of this idea. After several years of exploring techniques for standardising colour assessment,
the team settled on the use of colour cards. After testing this technique with tourists at the Heron Island
resort and other locations (Siebeck et al. 2006b), a colour card was developed that is now being used by
interested amateurs and professional researchers in over 30 countries.
Background
Coral reefs worldwide have experienced coral bleaching with increasing frequency and severity over the
past 30 years. Forward projections of sea temperatures suggest that this trend will continue due to rising
global temperatures. A complete understanding of these changes is in its infancy and will depend in part
on cheap and reliable methods to assess the extent of stress on a particular reef. To date, the assessment
methods used are either expensive (remote sensing techniques), labour intensive (e.g. video transects,
manta tows) or invasive (assessments of symbiont densities). We have developed a cheap, simple, non-
invasive method for the assessment of coral health that makes use of changes in the colour of corals during
bleaching and recovery. Results show that this method can detect multiple grades of coral bleaching
including the subtle differences due to the natural environmental fl uctuations.
Several different methods have been used to assess coral bleaching on various different scales. Remote
sensing techniques are useful as they allow us to monitor the state of large areas of reef simultaneously
(Dustan et al. 2001; Hedley and Mumby 2003). However, satellite images and images obtained from aircraft
are expensive, have low spatial resolution and are associated with a large error rate (Andréfouët et al. 2002;
Hedley and Mumby 2003). Video transects and manta tows are probably the most widely used methods to
assess the health of individual reefs (Miller and Müller 1999). However, the methods are labour intensive
and time consuming and require personnel trained in scuba diving and coral species recognition. The most
accurate method of investigating coral health is to measure photosynthetic activity (Fitt et al. 2001). This is
often used in combination with counting the number of symbiotic dinofl agellates left in the tissue of the
coral and also determining the chlorophyll a content (Hoegh-Guldberg and Smith 1989). In this way the
physiological condition of individual coral colonies can be determined. However, due to their requirement
of specialist equipment and the lengthy time of the process they are only useful on the scale of individual
coral colonies.
This project developed a simple, cheap and non-invasive method to monitor reef health that makes use of
the observed colour change of corals when experiencing stress. Our new method is sensitive enough to
detect the natural fl uctuations of reef colouration and it is possible to distinguish those from the colouration
change during bleaching events. In testing this method, we demonstrate a fi ner, multi-scale method that
goes far beyond widely used classifi cations that simply detect dead, bleached, semi-bleached or healthy
corals (4-point scale). Since our method is cheap and requires minimal training, it is perfectly suited for use
in a global network of places where anyone, scientist, student or any member of the community can be part
of a local reef monitoring program.
69
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 3: Biomarkers of stress
Materials and methods
The colour chart method makes use of the fact that stressed corals lose their symbiotic dinofl agellates and
3
as a consequence change colour. The aim of our method was to quantify this change and to create a chart
that represents the different stages of bleaching. In order to provide a valid tool for scientifi c measurement
the colour charts were cross-validated and calibrated with some of the standard measurements of assessing
coral health. Coral health was manipulated in thermal stress experiments as well as corals in various health
states collected from the reef crest at Heron Island. Full details of the methods are contained within the
paper published from this project (Siebeck et al. 2006b). 2006).
Hue: 50
Figure 29. Colour card design.
The four different colour categories
C1
are arranged in groups around the
B1
B2
B3
B4
B5
B6
sides of the chart. Within each
C2
category, the colour squares are
E6
arranged according to their brightness
and saturation values. B1, C1, D1 & E1
C3
E5
are identical in terms of brightness and
saturation but vary in hue. Observers
C4
Hue: 31
Hue: 8
E4
Coral Health Monitoring Chart
simply hold the waterproof chart next
to a coral and determine the best
C5
colour match for the brightest and
E3
darkest area of the coral (avoiding the
C6
tips of branching corals as well as
E2
purple coloured corals).
D6
D5
D4
D3
D2
D1
E1
H: 21
H: 21
H: 21
H: 21
H: 21
Hue: 21
S: 255
S: 196
S: 196
S: 161
S: 151
Saturation: 148
B: 30
B: 95
B: 150
B: 190
B: 220
Brightness: 236
Results and discussions
This project developed and explored the use of colour cards to measure the loss of colour during coral
bleaching. In a series of fi eld trials (the earliest began in the Block B preparatory phase of the project)
outlined in the associated fi gures, the colour card methodology was capable of detecting very small
changes in colour as corals experienced bleaching. The equipment requirements and the costs for
conducting a survey are in order of magnitude less than alternative methods. In addition, the colour chart
method requires almost no training, so that it is possible to post an information kit to interested people
worldwide and gain data from a large variety of `new' reefs that are not yet monitored as part of a scientifi c
program. The partners in this project (from the Vision, Touch and Hearing Centre at the University of
Queensland) have built an extensive database and involved community groups around Australia in a
monitoring exercise known as Coral Watch. Further details about the method and its applicability can be
obtained at www.coralwatch.org.
Figure 30. Results for the repeated
a
colour measurements of the 20 corals
6
on the Heron Island Reef Flat.
Healthy in March
Bleached in March
The average colour scores (mean ± se)
5
are given for the group of bleached
4
corals (grey) and the group of normally
pigmented corals (black). The colour
3
scores of the two groups are
signifi cantly different during the time
Colour score 2
of the fi rst fi ve measurements
1
(March-May 02). The arrow indicates
the time a rainstorm coincided with a
0
Mar 02
Apr 02
May 02
Jun 02
Jul 02
Aug 02
Sep 02
Oct 02
Nov 02
Dec 02
Jan 03
Feb 03
Mar 03
Apr 03
low tide. Formerly normally pigmented
corals bleached more strongly than
freshly recovered corals. Broken lines
indicate interruption of the survey.
Key literature generated with Full/partial project support:
70
1.
Siebeck UE, Marshall NJ, Klüter A, Hoegh-Guldberg O (2006) Monitoring coral bleaching using a colour reference card. Coral Reefs 25:453-460
4
Theme 4
Projections of change and
socio-economic impact
Understanding how the future will unfold as climate change continues to
impact tropical marine ecosystems is crucially important to both management
and policy development. In the former case, understanding how reef
ecosystems will be impacted will provide important foresight (and hence
an ability to anticipate and prepare) for how the problems will develop
over the coming decades and century. In the latter case, understanding
what is at stake when it comes to important coastal ecosystems, like coral
reefs, plays a very important role in determining international policy targets
such as atmospheric carbon dioxide. This theme involved a single project
which focused on developing credible scenarios of the future and effective
responses to climate change in order to allow rational discussions about how
management and policy should be poised to respond to climate change.
71
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 4: Projections of change and socio-economic impact
Project 10. Coral reefs in a century of rapid change:
projections of change and effective responses.
4
John Bythell, William K Fitt, Ruth Gates, Ove Hoegh-Guldberg, Roberto Iglesias-Prieto, Mike P. Lesser,
Yossi Loya, Tim R. McClanahan, Rob van Woesik, and Christian Wild
Location: Across all four Centres for Excellence.
Key results
Understanding how the future will unfold is critical to
planning an effective response to climate change.
Understanding the key drivers behind the response of
coral reefs to environmental change is a primary goal of
Projects 1-9. Project 10 focused on establishing credible
scenarios for the future based on this information. Like the
other projects, it achieved its goal and produced a number
of key papers reviewing an understanding of the future.
Three key steps were identifi ed in achieving the goals of
this project. These were (1) to fi ll the gaps in knowledge as
perceived by the BWG that stand in the way of our ability
to build credible scenarios of the future; (2) to convene a
major workshop in association with the International Coral
Reef Symposium (Fort Lauderdale, USA) in July, 2007, and
Photo: A. Zvuloni
(3) to synthesise both sets of information into projections to be published in a major Journal. All three steps
were achieved. One of the outputs, published in Science magazine in 2007, has had a substantial impact
on global policy with respect to climate change and natural ecosystems. Already heavily cited, this paper
was released to coincide with the UNFCCC climate change negotiations held in Bali in December 2007.
This paper plus many other similar outputs has ensured that the science of the BWG has had a major
impact on policy at both regional and global levels.
Background
One of the key fi ndings of this exercise was to identify how unusual contemporary conditions already are
within tropical oceans. Comparing present day conditions to those which have occurred in tropical oceans
over the past 420,000 years revealed that we have already travelled well outside the conditions under
which present day coral reefs have developed. The paper also identifi ed the newness of two critical
thresholds for the temperature and carbonate ion concentration beyond which coral reefs fail to be
maintained. This analysis leads to the conclusion that we must, as an international community, avoid
increasing atmospheric carbon dioxide beyond 450 ppm if we are to retain carbonate coral reef ecosystems
on planet Earth. The paper then proposed a series of three photographs to illustrate the types of ecosystems
which will result as we travel from today's atmospheric carbon dioxide concentration, to those around 500
ppm, and beyond. As will be discussed in the section on "Contributions to Policy Development", this
paper and its conclusions has had a demonstrable impact on policy development at the national and
international levels.
72
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 4: Projections of change and socio-economic impact
Atmospheric CO2 content (ppm)
200
300
400
600 800 1200
8
t
h
C
r
ar
e
s
bona
C)
4
o
6
h
o
l
d 480 ppm
Reefs not
t
e
dominated
Thermal
C
by corals
4
threshold
0.2 pH
(+2oC)
2
s temperature (
Interglacial
B
Non-carbonate reef
A
coral communities
0
Today
- 2
- 4
Glacial
Deviation from today'
- 6400
300
200
100
0
Carbonate ion concentration ( mol kg-1)
Fig. 1. (A) Linkages between the buildup of atmospheric CO2 and the slowing
(25°C), and total alkalinity (2300 mmol kg-1). Further details of these
of coral calcification due to ocean acidification. Approximately 25% of the
calculations are in the SOM. Acidity of the ocean varies by ± 0.1 pH units
CO2 emitted by humans in the period 2000 to 2006 (9) was taken up by the
over the past 420,000 years (individual values not shown). The thresholds for
ocean where it combined with water to produce carbonic acid, which releases a
major changes to coral communities are indicated for thermal stress (+2°C) and
proton that combines with a carbonate ion. This decreases the concentration of
carbonate-ion concentrations ([carbonate] = 200 mmol kg-1, approximate
carbonate, making it unavailable to marine calcifiers such as corals. (B) Tem-
aragonite saturation ~ aragonite = 3.3; [CO2] atm = 480 ppm). Coral Reef
perature, [CO2] atm, carbonate ions concentrations reconstructed for the past
Scenarios CRS-A, CRS-B, and CRS-C are indicated as A, B, and C, respectively,
420,000 years. Carbonate concentrations were calculated (54) from CO2 atm and
with analogs from extant reefs depicted in Fig. 5. Red arrows pointing
temperature deviations from today's conditions with the Vostok Ice Core data set
progressively toward the right-hand top square indicate the pathway that is
(5), assuming constant salinity (34 parts per trillion), mean sea temperature
being following toward [CO2] atm of more than 500 ppm.
Figure 31. From Hoegh-Guldberg et al. 2007b
In a second study (Hoegh-Guldberg et al. 2009), the BWG contributed to a major study of how climate
change is likely to impact coastal ecosystems and communities within the Coral Triangle. The Coral Triangle
spans six countries in South-East Asia (Philippines, Indonesia, Malaysia, Papua New Guinea, Timor Leste,
and the Solomon Islands) and includes the highest density of coral reef organisms on the planet.
For example, 76% of all coral species and 37% of all coral fi shes are found along the 132,000 km of
coastline in this region (Hoegh-Guldberg et al 2009). In addition to having spectacular natural ecosystems,
the Coral Triangle is also home to 150 million people of which 100 million live in the coastal areas.
These people are mostly economically disadvantaged, and are highly dependent on coastal ecosystems
for their food and other resources. Unfortunately, coral reefs and mangrove ecosystems in this region are
rapidly declining, and are disappearing at the rate of 1-2% per year. If the current rate continues, coral reefs
in this region will be functionally extinct by the middle of the current century.
The study undertaken as part of Project 10 developed two scenarios of the future based on the input of
over 20 experts and consideration of the conclusions of 300+ expert publications. In one case, termed the
worst case, international treaties failed to constrain the rising atmospheric carbon dioxide, and attempts to
deal with the many other local stresses fail. In this scenario, coral reefs and other coastal ecosystems such
as mangroves, effectively disappear by 2100 as sea levels undergo rapid increases driven by soaring global
temperatures and carbon dioxide contents (which reach 700 ppm by the end of the century). Under this
scenario, the food security of at least 100 million people is severely threatened, while rising seas inundate
coastal communities and infrastructure.
Under the so-called "best case" scenario, international efforts to obtain deep cuts in greenhouse gas
emissions are successful, as are attempts to limit the impact of local stresses arising from pollution,
unsustainable coastal development, overexploitation of resources and destructive fi shing. While conditions
are challenging up to the middle of the century, the benefi ts from effective action at the local and global
levels means that climate change is manageable and the impacts on coastal people and their communities
far less.
As described in the section on contributions to policy development, the study led to a number of policy
recommendations. An illustration of these two scenarios was distributed to world leaders attending the
Coral Triangle Summit meeting in Manado in Indonesia, and judging by media reports had a major impact
73
on regional leaders and their negotiating teams.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 4: Projections of change and socio-economic impact
4
Fig. 5. Extant examples of r
Fig 5 Extant examples of eefs fr
reefs om the Gr
from the
eat Barrier Reef that ar
Great Barrier Reef that
e used as analogs for the ecological structur
are used as analogs for the ecological
es we anticipa
structures w
we
te for Coral Reef Scenarios CRS-A, CRS-B
anticipate for Coral Reef Scenarios CRS-A CRS-B
and CRS-C (see text). The [CO2]atm temperature increases shown are those for the scenarios and do not refer to the locations photographed. (A) Reef slope
communities at Heron Island. (B) Mixed algal and coral communities associated with inshore reefs around St. Bees Island near Mackay. (C) Inshore reef slope around
the Low Isles near Port Douglas. [Photos by O. Hoegh-Guldberg]
Figure 32. From Hoegh-Guldberg et al. 2007b. Predicted scenarios for coral reefs under increasing amounts of atmospheric carbon
dioxide. If concentrations of carbon dioxide remain at today's level, many coral dominated reefs will survive (left-hand panel)
although there will be a compelling need to increase their protection from local factors such as deteriorating coastal water quality
and overfi shing. If carbon dioxide concentrations continue to rise as expected, reefs will become less dominated by corals and
increasingly dominated by seaweeds (middle panel). If carbon dioxide levels continue to rise as we burn fossil fuels, coral reefs will
disappear and will be replaced by crumbling mounds of eroding coral skeletons. In concert with the progression from left to right is
the expectation that much of the enormous and largely unexplored biodiversity of coral reefs will disappear. This will almost
certainly have major impacts on the tourist potential of coral reefs as well as their ability to support fi sheries, both indigenous and
industrial.
Other activities
As described above, Hoegh-Guldberg coordinated and led (with A. C. Baker) a special symposium entitled
"Is 500 ppm CO and 2°C of warming the `tipping point' for coral reefs? If so, how should we respond?" at
2
the International Coral Reef Symposium, Fort Lauderdale, July 2008. This meeting attracted over 50
contributors over a 3 day schedule. Christian Wild also co-chaired session 28 "Coral reefs and coral
communities in a changing environment" at ASLO Aquatic Sciences Meeting, 25-30 January 2009, Nice,
France. The latter will appear as a special edition in Coral Reefs and will be co-edited by Dr Wild.
Worst Case (A1B)
Best Case (B1)
800
100
480
100
Atmospheric CO2
750
Coral cover relative to today (%)
Coral cover relative to today (%)
460
Atmospheric CO2
700
440
650
420
Strong
600
Management
50
400
50
550
380
500
Weak
450
360
Management
Atmospheric carbon dioxide (ppm) 400
Weak
Strong
Atmospheric carbon dioxide (ppm) 340
Management
Management
350
0
320
0
1950
2000
2050
2100
2150
2200 2250
2300
2350
1950
2000
2050
2100
2150
2200 2250
2300
2350
Year
Year
Figure 33. Hypothetical trajectory of the concentration of atmospheric CO and coral cover in worst (A1B) and
2
best case (B1) scenario. The effect of managing local stressors is shown. Hoegh-Guldberg et al. 2009
74
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Theme 4: Projections of change and socio-economic impact
Key literature generated with full/partial project support:
There have been a number of key publications from the BWG in this project area. These papers have generated considerable interest, and have painted scenarios of the future in
a world in which we do or do not take effective action on coral reefs. Their message is very clear: continued growth in the emissions of carbon dioxide will eliminate functional
4
coral reef ecosystems within the next 30 to 50 years. As explained elsewhere, this has serious implications for tropical marine biodiversity, as well as the food and resources for
several hundred million people.
1.
Caldeira K, Archer D, Barry JP, Bellerby RGJ, Brewer PG, Cao L, Dickson AG, Doney SC, Elderfi eld H, Fabry VJ, Feely RA, Gattuso JP, Haugan PM, Hoegh-Guldberg O, Jain
AK, Kleypas JA, Langdon C, Orr JC, Ridgwell A, Sabine CL, Seibel BA, Shirayama Y, Turley C, Watson AJ, Zeebe RE (2007) Comment on "Modern-age buildup of CO and
2
its effects on seawater acidity and salinity" by Hugo A. Loáiciga. Geophysical Research Letters 34
2.
Carpenter KE, Abrar M, Aeby G, Aronson RB, Banks S, Bruckner A, Chiriboga A, Cortes J, Delbeek JC, DeVantier L, Edgar GJ, Edwards AJ, Fenner D, Guzman HM,
Hoeksema BW, Hodgson G, Johan O, Licuanan WY, Livingstone SR, Lovell ER, Moore JA, Obura DO, Ochavillo D, Polidoro BA, Precht WF, Quibilan MC, Reboton C, Richards
ZT, Rogers AD, Sanciangco J, Sheppard A, Sheppard C, Smith J, Stuart S, Turak E, Veron JEN, Wallace C, Weil E, Wood E (2008) One-Third of reef-building corals face
elevated extinction risk from climate change and local impacts. Science 321:560-563
3.
Dodge RE, Birkeland C, Hatziolos M, Kleypas JA, Palumbi SR, Hoegh-Guldberg O, van Woesik R, Ogden JC, Aronson RB, Causey BD, Staub F (2008) A call to action for coral
reefs. Science 322:189-190
4.
Donner SD, Skirving WJ, Little CM, Oppenheimer M, Hoegh-Guldberg O (2005) Global assessment of coral bleaching and required rates of adaptation under climate
change. Global Change Biology 11:2251-2265
5.
Fabricius K, Hoegh-Guldberg O, Johnson J, McCook L, Lough J (2007) Vulnerability of coral reefs of the Great Barrier Reef to climate change. Climate change and the Great
Barrier Reef Great Barrier Reef Marine Park Authority and Australian Greenhouse Offi ce, Australia:515554
6.
Hoegh-Guldberg O (2005) Low coral cover in a high-CO world. Journal of Geophysical Research-Oceans 110:C09S06
2
7.
Hoegh-Guldberg O (2006) Ecology: complexities of coral reef recovery. Science 311:42-43
8.
Hoegh-Guldberg O (2006) Thermal biology of coral reefs: will coral reefs survive global warming? Comparative Biochemistry and Physiology a-Molecular & Integrative
Physiology 143:S131-S131
9.
Hoegh-Guldberg O (2007) Chapter 10 "Climate change and the Great Barrier Reef". In: Hutchings P., Kingsford M., Hoegh-Guldberg O. (eds) Great Barrier Reef: Biology,
Environment and Management. CSIRO Press.
10. Hoegh-Guldberg O (2009) Climate change and coral reefs: Trojan horse or false prophecy? A response to Maynard et al. (2008). Coral Reefs, in press
11.
Hoegh-Guldberg O, Anthony K, Berkelmans R, Dove S, Fabricus K, Lough J, Marshall P, van Oppen M, Willis B, Chapter 12 "The vulnerability of reef-building corals to
climate change" In: Johnson J, Marshall PA (eds) Climate change and the Great Barrier Reef. GBRMPA, Townsville p271-308
12.
Hoegh-Guldberg O, Australia G (1999) Climate change, coral bleaching and the future of the world's coral reefs. Marine & Freshwater Research 50:839-866
13.
Hoegh-Guldberg O, Hughes L, McIntyre S, Lindenmayer DB, Parmesan C, Possingham HP, Thomas CD (2008) Where Species Go, Legal Protections Must Follow Response.
Science 322:1049-1050
14.
Hoegh-Guldberg O, Hughes L, McIntyre S, Lindenmayer DB, Parmesan C, Possingham HP, Thomas CD (2008) Assisted colonization and rapid climate change. Science
321:345-346
15.
Hoegh-Guldberg O, Mumby PJ, Hooten AJ, Steneck RS, Greenfi eld P, Gomez E, Harvell DR, Sale PF, Edwards AJ, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R,
Muthiga N, Bradbury RH, Dubi A, Hatziolos ME (2008) Coral adaptation in the face of climate change - Response. Science 320:315-316
16.
Hoegh-Guldberg O, Mumby PJ, Hooten AJ, Steneck RS, Greenfi eld P, Gomez E, Harvell CD, Sale PF, Edwards AJ, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R,
Muthiga N, Bradbury RH, Dubi A, Hatziolos ME (2007) Coral reefs under rapid climate change and ocean acidifi cation. Science 318:1737-1742
17.
Hoegh-Guldberg, O (2007). Impacts of Climate Change on Coral Reefs. pp 59-68. In Impacts of Climate Change on Australian Marine Life. A. J. Hobday, T. A. Okey, E. S.
Poloczanska, T. J. Kunz and A. J. Richardson (Eds.). CSIRO Marine and Atmospheric Research
18.
Hoegh-Guldberg O, Mumby PJ, Hooten AJ, Steneck RS, Greenfi eld P, Gomez E, Harvell CD, Sale PF, Edwards AJ, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R,
Muthiga N, Bradbury RH, Dubi A, Hatziolos ME (2007) Coral reefs under rapid climate change and ocean acidifi cation. Science 318:1737-1742
19.
Hoegh-Guldberg, O (2007). Impacts of Climate Change on Coral Reefs. pp 59-68. In Impacts of Climate Change on Australian Marine Life. A. J. Hobday, T. A. Okey, E. S.
Poloczanska, T. J. Kunz and A. J. Richardson (Eds.). CSIRO Marine and Atmospheric Research
20.
Hoegh-Guldberg, O. (2006) Impacts of Climate Change on Coral reefs. In, Hobday, A.J., Okey, T.A., Poloczanska, E.S., Kunz, T.J. & Richardson, A.J. (eds) 2006. Impacts of
climate change on Australian marine life. Report to the Australian Greenhouse Offi ce, Canberra, Australia. June 2006.
21.
Kleypas JA, Buddemeier RW, Eakin CM, Gattuso JP, Guinotte J, Hoegh-Guldberg O, Iglesias-Prieto R, Jokiel PL, Langdon C, Skirving W, Strong AE (2005) Comment on
"Coral reef calcifi cation and climate change: The effect of ocean warming''. Geophysical Research Letters 32: 320-323:L08601
22.
Poloczanska ES, Babcock RC, Butler A, Hobday AJ, Hoegh-Guldberg O, Kunz TJ, Matear R, Milton DA, Okey TA, Richardson AJ (2007) Impacts of Climate Change on
Australian Marine Life. In: Gibson RN, A ARJ, Gordon JDM (eds) Oceanography and Marine Biology: An Annual Review, p 407-478
23.
Raven J, Caldeira K, Elderfi eld H, Hoegh-Guldberg O, Liss P, Riebesell U, Shepherd J, Turley C, Watson AJ (2005) Ocean acidifi cation due to increasing atmospheric carbon
dioxide, London
24.
Sandin SA, Smith JE, DeMartini EE, Dinsdale EA, Donner SD, Friedlander AM, Konotchick T, Malay M, Maragos JE, Obura D, Pantos O, Paulay G, Richie M, Rohwer F,
Schroeder RE, Walsh S, Jackson JBC, Knowlton N, Sala E (2008) Baselines and degradation of coral reefs in the Northern Line Islands. PLoS ONE 3:e1548
75
Management
implications
Photo: A. Zvuloni
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Management implications
Coral reef ecosystems are facing unprecedented stress from human activities (Jackson et al. 2001a; Pandolfi
et al. 2005; Hughes et al. 2007). Until 10 years ago, local factors such as overfi shing, pollution and declining
water quality were seen as the greatest threats to the survival of coral reefs. Growing evidence in addition
to events such as the worldwide mass bleaching and mortality event in 1998 have convinced many research
scientists that global climate change represents the most serious near-term threat. (Hoegh-Guldberg
1999b). Either way, both local and global threats are combining to rapidly decrease the distribution and
abundance of reef-building corals and the ecosystems they build.
Accurate knowledge and understanding of the changes occurring within coral reef ecosystems is essential
to any effective management response. In this regard, the Bleaching Working Group identifi ed several key
areas in which it could contribute to the resources available to reef managers.
Coral-symbiont responses to thermal stress
By improving our understanding of the coral-Symbiodinium-bacterial holobiont, the BWG has identifi ed
the inherent complexity that exists between the various elements that go into making healthy reef building
corals. In this respect, it is clear that reef building corals live in a delicate balance with their various symbionts,
with stress leading to a breakdown of communication and synergy between the various partners.
The surprising discovery of nitrogen-fi xing bacteria adds an interesting layer to the complexity and biosis
that makes up healthy coral communities (Lesser et al. 2007b).
The exploration of the fundamental mechanism of coral bleaching leads to a number of observations which
are reviewed for reef managers. For example, the central role of light causing damage in heat stressed
corals suggests a number of potential insights into the variability observed on coral reefs. For example,
it is clear that reducing light levels on coral reefs could potentially act as a way of reducing the impact of
heat stress (Enriquez et al. 2005). While this cannot be done at the level of entire coral reefs, it does suggest
strategies for managers to protect small areas of highly valuable coral reef. Stemming from this work, there
are now a number of initiatives looking at whether or not shading coral reefs during heat stress might
represent an effective adaptation response.
In exploring the diversity and fl exibility of coral-Symbiodinium associations, it has become clear from the
last fi ve years of research that these co-evolved mutualistic symbioses are not fl exible on the timescale of
the bleaching event. In this respect, the Working Group found little support for the adaptive bleaching
hypothesis, and particularly for the ability of corals to expel one genotype of Symbiodinium and adopt a
brand new variety with a higher thermal tolerance (Hoegh-Guldberg et al. 2007b; Goulet et al. 2008;
LaJeunesse 2008; Stat et al. 2008 ). The observation that coral hosts tend to be found with the same
subclade of Symbiodinium across vast areas of the Indo-Pacifi c or Caribbean oceans also confi rms that the
ability of corals to rapidly evolve a new, more tolerant symbiosis does not occur over years or decades, and
that it is an evolutionary process that takes hundreds if not thousands of years to occur. It would appear that
relying on these mechanisms in terms of the management of coral reefs will not generate outcomes for reef
resilience. These ideas are explored further in the number of key publications and studies arising from BWG
activities over the past fi ve years (Iglesias-Prieto et al. 2004; LaJeunesse 2005c; Lajeunesse 2005b;
LaJeunesse et al. 2008; Sampayo et al. 2008 ).
Development of tools for detecting change
Being able to detect changes in coral reef ecosystems in response to global changes is a critical part of
management responses. In this respect, it is impossible to devise an effective management response
without effective levels of information or tools for detecting change. The BWG has contributed to a
number of different areas. Firstly, in terms of biochemical tools for understanding stress within corals, it
appears there are a number of tools which could potentially be deployed to understand whether or not
stress is occurring. The successful research into stress markers such as heat shock proteins, fl uorescent
proteins and a number of other markers will contribute to important insights that managers require when it
comes to change within the ecosystem that they are managing. Colour cards used to detect and measure
coral bleaching were developed in partnership with researchers from the Vision, Touch and Hearing Centre
(VTHC) at the University of Queensland (Siebeck et al. 2006a). Colour cards are now being readily used
in the assessment of coral health across a vast array of sites internationally. Their use is being coordinated
by CoralWatch, which is an organisation based at the University of Queensland, Brisbane, Australia
77
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Management implications
(www.coralwatch.org). As part of this project, coral colour cards have been incorporated into a cheap,
simple, non-invasive method for the monitoring of coral bleaching, and assessment of coral health.
The charts can and are being used by anyone scientists, school children, tourists and politicians.
Ecological responses to climate change impacts
The ecological studies undertaken by the BWG spanned the four Centres of Excellence, pursuing a set of
common sampling protocols for ecological indicators of change on coral reefs. This research has refi ned a
number of tools for detecting change on coral reefs, and has suggested a set of principles and design
elements for establishing ecological monitoring of change of coral reefs. Key publications and methodologies
are clearly contributing to the management of coral reefs as change occurs. As stated above, without
effective and accurate ecological information, our ability to detect and respond to changes in the health of
reefs will be otherwise severely limited.
Ecological studies established key linkages between the structures built by corals and other calcifi ers, and
other coral reef organisms such as fi shes. When this structure breaks down, fi sh populations dwindle with
the loss of some 50% of species (Graham et al. 2008; McClanahan et al. 2008b; Pratchett et al. 2008;
Wilson et al. 2008). This clearly has implications for people in terms of the services that coral reefs provide,
such as food and tourism. In identifying the key drivers for these populations, the research undertaken by
the BWG has suggested that preserving the three-dimensional structure of reefs is an overriding important
management objective. Moreover, reducing damage from boating activities, such as anchors and ship
strikes on a local scale, is important so that reefs maintain the capacity to maintain themselves as oceans
warm and acidify.
In concert with the results of many other research groups, the BWG has identifi ed the important role that
maintaining and improving the ecological resilience of coral reefs will play in a changing global environment
(McClanahan and Cinner 2008; McClanahan et al. 2008c; McClanahan et al. 2008b; McClanahan et al.
2009). In this respect, reducing other stresses such as overfi shing, pollution and declining water quality
becomes an even greater priority as conditions worsen under global climate change. This suggests that
strategies associated with marine protected areas, greater regulations on fi shing and, control of impacts
arising from poor land-use along tropical coastlines, should be stepped up in terms of their implementation.
This said, any effort to improve the resilience of coral reefs to climate change will only work if effective
strategies are put in place to rapidly reduce the build up of greenhouse gases in the Earth's atmosphere.
Projections of future change
One of the key contributions that the BWG has made to the management of coral reefs under rapid global
climate change has been to analyse the key drivers and establish a series of credible projections on how
coral reefs will change as climate change deepens (Hoegh-Guldberg et al. 2007b; Schuttenberg and
Hoegh-Guldberg 2007). Understanding these futures is critically important to the management of coral
reefs because it sets the context under which reef managers will be operating in the future. These studies
have also provided effective policy tools and advice, which adds to the ability of reef managers to
communicate and inform the governments for which they work. These aspects will be explored in the
policy section.
78
Contributions to
policy development
The research outputs of the Bleaching Working
Group have made fundamental contributions to the
direction of policy with respect to local and regional
governments, as well as having an important impact
on international climate change negotiations.
Photo: A. Zvuloni
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Contributions to policy development
Impacts on local and regional policy development
BWG activities have spanned the four CRTR Centres of Excellence, and through their interaction with local
researchers have had a direct impact on local attitudes, knowledge and policy developments. One of the
most important contributions occurred recently when BWG members and other CRTR members, participated
in a large-scale study of the local and global pressures associated with coral reefs in the Coral Triangle.
As described before, the Coral Triangle spans six countries in Southeast Asia and contains the most
biologically rich marine ecosystems on the planet. It also contains dense coastal communities which rely
heavily on the sea and coastal resources for food, income and livelihoods. As elsewhere, coral reefs are in
decline and are disappearing at the rate of 1-2% per year. A large number of local and global stressors are
to blame for this decline.
Broad sweeping strategies to deal with local stress factors
such as pollution, poor-water quality, overexploitation of
fi shery stocks, unsustainable coastal development and
destructive fi shing are required if this steady decline in
these important coastal ecosystems is to be halted.
Beginning with the Bali meeting in 2007, the six leaders of
the Coral Triangle countries, along with international
partners such as Australia and the United States, pledged
to commit to signing an original plan of action to deal with
the serious threats arising from local factors.
In order to facilitate and inform the leadership teams that
were headed into this meeting, Hoegh-Guldberg and 20
other authors completed a study of the atmospheric,
biological, economic, and social drivers associated with Figure 34. Launch of the Coral Triangle study led by
both local and global threats to coastal ecosystems. This BWG member Ove Hoegh-Guldberg (right). The study
study was launched at the Coral Triangle Summit in Manado was launched by the Indonesian Environment Minister
Witoelar (centre) on May 13, 2009. Lida Pet-Soede from
(May 11-15, 2009) by the Indonesian Environment Minister WWF is also shown.
Witoelar and was distributed to leaders and their
negotiating teams. Several leaders in Southeast Asia made reference to it in some of the over 900 media
articles about the study, committing to the 10 key recommendations that it made.
The policy recommendations were (see full report, Hoegh-Guldberg et al. 2009):
1.
Create a binding international agreement to reduce the rate and extent of climate change. To do
this, emissions should peak no later than 2020, and global warming limited to less than 2°C above
pre-industrial temperatures (i.e. atmospheric CO < 450 ppm) by 2100. This will require steep global
2
cuts in emissions that are 80% below 1990 levels by 2050. Inherent to this recommendation is the
creation of an aggregate group reduction target for developed countries of 40% below 1990 levels by
2020, and a reduction from business-as-usual emission levels for developing countries of at least 30%
by 2020.
2.
Take immediate action to establish national targets and plan to meet these commitments such
that the international agreement can be achieved. This report shows that nations in the Coral Triangle
region have a great deal at stake if climate change continues unchecked. They must become part of
the solution and must do this expeditiously. Lag-times and non-linear responses in the climate system
mean that every day we wait to take action, the problem becomes dramatically more diffi cult and
protracted to address successfully.
3.
Pursue the establishment of integrated coastal zone management across the region to reverse the
decline of the health of coastal ecosystems. This should include implementation of policies that
eliminate deforestation of coastal areas and river catchments, reduce pollution, expand marine
protected areas, regulate fi shing pressures and abolish destructive practices. It is important that these
actions not aim to restore or protect ecosystems for past conditions, rather they must prepare for
conditions under a changing climate.
80
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Contributions to Policy Development
4.
Support the establishment of a global adaptation fund to meet the adaptation needs of developing
countries. While some of the cost of adapting to climate change can be met by redirecting current
resources that are being used in a manner that is vulnerable to climate change, the growing challenge
of climate change will result in new and increasing costs. Recent efforts to establish a fund through the
Global Environment Facility (GEF) should be supported and accelerated. These funds will be required
to meet these costs given the nature of the problem and that the disproportionate brunt of the hardship
caused by the problem is borne by developing countries. International funds will be necessary to meet
these needs.
5.
Build adjustable fi nancial mechanisms into national budgeting to help cover the increasing costs
of adaptation to climate change. Climate change will require not only new funds, but also a
reassessment of current spending so that funds are not spent in ways that are not `climate-smart' - in
other words, on efforts that are not resilient to climate change. Every effort should be made to avoid
spending funds and taking actions that exacerbate the problem of climate change.
6.
Establish governance structures that integrate resource and development management to provide
robust protection of both in the face of climate change. Adaptation plans cannot be developed on
a sector-by-sector basis. Doing so risks creating problems such as adaptation being effective against
one issue but maladaptive against another. It will be important to plan holistically and create governance
structures that can support, implement and monitor these efforts.
7.
Build the socio-ecological resilience of coastal ecosystems and develop stakeholder and community
engagement processes for communities to improve their ability to survive climate change impacts.
Involving coastal people and communities in planning provides greater stability and effi cacy for
solutions to social and ecological systems within the Coral Triangle. Establish ecosystem-based
adaptation that focuses on protecting the fundamental ecosystem processes that underline the services
valuable to society--particularly local communities who depend on them for the most basic needs.
Fundamentally, it will be local knowledge that generates innovative adaptation strategies which may
prove most successful. Reducing the infl uence of local stress factors on coastal ecosystems makes them
able to better survive climate change impacts. Protecting the diversity of components (communities,
populations, and species) under the guidance and actions of local people strengthens the resolve of
these systems in the face of climate change.
8.
Critically review and revise conservation and development efforts at the local, national and
regional levels for their robustness in the face of climate change. Business-as-usual conservation
and development will not achieve success. The new mode of action requires integration between
conservation and development, and the realisation that many past approaches are no longer effective
due to the impacts of climate change.
9.
Build capacity to engage on planning for climate change issues from origins to strategies and
actions to address it with civil society. Climate change planning, both mitigation and adaptation, will
require that we educate current and future practitioners, as well as the concerned constituencies.
Mechanisms must be created to develop current resource managers and planners so that they can
immediately implement these new approaches. As the problem of climate change is not one that will be
solved in this generation, planning and responses to climate change will be iterative as the target
continues to move over the coming centuries. Therefore, it will also be necessary to develop training for
future capacity through education in academic settings. Informed stakeholder and community
engagement is at the core of successful adaptation, so in addition to professionals and students, civil
society must be given access to the information they need to understand and respond to climate change.
10. Focus adaptation on playing a role in economic stimulus, especially in job creation and fi nancial
mobilisation. Private-public sector incentive schemes, regional/international arrangements and
investment partnerships (e.g. national insurance reform and special-access loan schemes) need to
better incorporate risk management and adaptation strategies to reduce investment risk and maintain
positive fi nancial conditions.
81
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Contributions to policy development
International climate change policy
One of the goals of the Coral Reef Targeted Research Program is to provide advice to policymakers on a
range of issues associated with coral reefs and rapid environmental change. Given the graphic way that
coral reefs respond to warming seas (i.e. mass coral bleaching and mortality), they have played an important
role in illustrating the consequences of further changes in carbon dioxide and sea temperature. One of the
ambitions of the Bleaching Working Group's research agenda was to explore, verify and recommend levels
of atmospheric carbon dioxide that would be considered safer for coral reefs. In this respect, several
outputs of Project 12 were aimed specifi cally at bringing the science to the policy debates associated with
the climate change negotiations culminating in the Congress of Parties (COP) 15, in Copenhagen in
December 2009.
In December 2007, members of the BWG led a study which investigated the unusual nature of current
conditions in tropical seas by comparing temperatures and carbonate ion concentrations to those from the
past 420,000 years (using Vostok Ice Core data). This paper revealed that conditions in tropical oceans are
already well outside those in which oceans have been over this period, which experienced large perturbations
associated with the glacial cycle. The paper has attracted signifi cant attention and is now ISI's hottest paper
(most cited over the past two years) in both the area of "climate change" and "ocean acidifi cation" (cited
81 times in <18 months). In addition to gaining considerable media attention, the review has had a
direct impact on the perspective of safe levels of atmospheric carbon dioxide at various national and
international forums.
For example, the BWG Chair was commissioned by the Australian Federal Government's Garnaut Review
to submit a paper on the implications of climate change for Australia's Great Barrier Reef. This contribution
led directly to the admission by the Australian Government that exceeding 450 ppm carbon dioxide in the
atmosphere would have dire consequences for the Great Barrier Reef. The conclusions of the paper have
also fed into World Bank dialogue (the Chair addressed audiences such as the World Bank's Country
Environment Managers), and the results were recently presented at the climate change science summit
meeting in Copenhagen in March 2009. This information was also used in a recent study also led by
Hoegh-Guldberg which examined the impacts of a changing climate on the coastal ecosystems and people
of the Coral Triangle, one of the most diverse and populated areas of the planet. This particular study
received enormous attention (>900 media articles) and fed into the successful signing of the Coral Triangle
Initiative, one of the most exciting regional conservation initiatives ever taken within Southeast Asia.
In addition to recommending deep cuts in greenhouse gas emissions, the study linked action on local
stresses to adaptation measures. These have now been included on the agenda of several countries
as they head towards Copenhagen for the climate change negotiations associated with COP15,
in December, 2009.
82
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Contributions to policy development
Key literature generated with full/partial project support:
1.
Hoegh-Guldberg, O (2008). Ten Commitments to Marine Ecosystems. In: Lindenmayer DB, Dovers S, Harriss Olson M, Morton S. (eds) Ten Commitments: Reshaping the
Lucky Country's Environment. CSIRO Publishing: Melbourne, pp. 228-231.
2.
Hoegh-Guldberg O, Mumby PJ, Hooten AJ, Steneck RS, Greenfi eld P, Gomez E, Harvell DR, Sale PF, Edwards AJ, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R,
Muthiga N, Bradbury RH, Dubi A, Hatziolos ME (2008) Coral adaptation in the face of climate change - Response. Science 320:315-316
3.
Hoegh-Guldberg O, Hughes L, McIntyre S, Lindenmayer DB, Parmesan C, Possingham HP, Thomas CD (2008) Where Species Go, Legal Protections Must Follow Response.
Science 322:1049-1050
4.
Hoegh-Guldberg O, Hughes L, McIntyre S, Lindenmayer DB, Parmesan C, Possingham HP, Thomas CD (2008) Assisted colonization and rapid climate change. Science
321:345-346
5.
Hoegh-Guldberg, O (2008). Ten Commitments to Marine Ecosystems. In: Lindenmayer DB, Dovers S, Harriss Olson M, Morton S. (eds) Ten Commitments: Reshaping the
Lucky Country's Environment. CSIRO Publishing: Melbourne, pp. 228-231.
6.
McClanahan T, Cinner J, Maina J, Graham N, Daw T, Stead S, Wamukota A, Brown K, Ateweberhan M, Venus V (2008b) Conservation action in a changing climate.
Conservation Letters 1:53-59
7.
McClanahan TR (2007a) Achieving sustainability in East African coral reefs. Journal of the Marine Science and Environment C5:13-16
8.
McClanahan TR (2007b) Testing for correspondence between coral reef invertebrate diversity and marine park designation on the Masoala Peninsula of eastern Madagascar.
Aquatic Conservation: Marine and Freshwater Ecosystems 17:409-419
9.
McClanahan TR (2008) Response of the coral reef benthos and herbivory to fi shery closure management and the 1998 ENSO disturbance. Oecologia 155:169-177
10.
McClanahan TR, Cinner JE (in press) A framework for adaptative gear and ecosystem-based management in the artisanal coral reef fi shery of Papua New Guinea. Aquatic
Conservation: Marine and Freshwater Ecosystems
11.
McClanahan TR, Cinner JE, Graham NA, Daw TM, Maina J, Stead SM, Wamukota A, Brown K, Venus V, Polunin NVC (2009b) Identifying reefs of hope and hopeful actions:
Contextualizing environmental, ecological, and social parameters to respond effectively to climate change. Conserv Biol 10.1111/j.1523-1739.2008.01154.x
12. Schuttenberg H, Hoegh-Guldberg O (2007) A World with Corals: What Will It Take? Science 318:42b
13.
McClanahan TR, Cinner JE, Maina J, Graham NAJ, Daw TM, Stead SM, Wamukota A, Brown K, Ateweberhan M, Venus V, Polunin NVC (2008c) Conservation action in a
changing climate. Conservation Letters 1:53-59
14.
McClanahan TR, Graham NAJ, Calnan JM, MacNeil MA (2007e) Toward pristine biomass: Reef fi sh recovery in coral reef marine protected areas in Kenya. Ecological
Applications 17:1055-1067
15.
McClanahan TR, R. SC, Cinner JE, Maina J, Wilson SK, Graham NAJ (in press-b) Managing fi shing gear to encourage ecosystem-based management of coral reefs fi sheries.
In: Riegl B (ed) Proceedings 11th International Coral Reef Symposium, Ft Lauderdale, USA
16.
Morton SR, Hoegh-Guldberg O, Lindenmayer DB, Olson MH, Hughes L, McCulloch MT, McIntyre S, Nix HA, Prober SM, Saunders DA, Andersen AN, Burgman MA, Lefroy
EC, Lonsdale WM, Lowe I, McMichael AJ, Parslow JS, Steffen W, Williams JE, Woinarski JCZ (2009) The big ecological questions inhibiting effective environmental
management in Australia. Austral Ecology 34:1-9
17.
Obura DO, Causey BD, Church J (2006) Management response to a bleaching event. In: Phinney P, Hoegh-Guldberg O, Kleypas JA, Skirving W, Strong A (eds) Corals and
Climate Change. American Geophysical Union, Washington DC
83
Research
training
The BWG project has provided crucial support for
17 student researchers and 2 postdoctoral fellows,
through either full or partial scholarship support,
support of research costs and assistance to attend
the many training and research workshops that
have been held during the project.
Photo: A. Zvuloni.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Amita Jatkar (India)
PhD student at the Newcastle University (UK)
I held a Leverhulme Trust studentship (2004-2008) to investigate the
structure and function of mucin genes and the biophysical properties of the
coral surface mucus layer. My recent work has included measuring the
surface mucus layer of corals using a novel technique developed for the
mammalian gut by colleagues in the Medical School at Newcastle University.
I have also used bioinformatics approaches to investigate mucin (MUC)
genes in coral EST databases and the Nematostella genome. To date we
have identifi ed at least 3 coral MUC genes and shown that the overall MUC
gene structure is similar to humans. I completed my PhD in 2008. I was
supported by the BWG to attend the joint BWG/DWG meeting in Mexico
(2005) and the International Coral Reef Symposium in Florida (2008).
Assaf Zvuloni (Israel)
PhD student at the University of Tel Aviv (Israel)
In coral reef populations spatial patterns may be the result of several
different processes that operate at different spatial scales. As a fi rst stage in
my work I examined and improved traditional sampling methods that were
found to lead to signifi cant biases in studying population demography
(Zvuloni et al. 2008). In the next study I inferred the transmission mode of
black-band coral disease from its spatial patterns in the fi eld (Zvuloni et al.
2009). My main fi nding was that local transmission via waterborne infection
is a signifi cant transmission mechanism of the disease. The third aspect I
explored for my Ph.D deals with additive partitioning of coral diversity
around Zanzibar Island (Tanzania). The results suggest that non-random
processes operating on a scale of a few kilometres affected the spatial
patterns of coral diversity around the island. This insight helps identifying
appropriate boundaries for studying mechanisms that generate and
maintain biodiversity within this region.
Caroline Palmer (UK)
PhD student at the Newcastle University (UK)
I started my PhD in 2007 jointly with Newcastle University, UK (with John
Bythell, BWG) and James Cook University, Australia (with Bette Willis,
DWG). I am investigating immune defences in corals as part of a Natural
Environment Research Council-funded project looking at bleaching impacts
on microbial communities. Recent work has shown the importance of the
melanin synthesis pathway in protecting corals against invasion by microbial
pathogens. I think coral immunity research will become increasingly
important in predicting corals ability to survive climate change. I was
supported for travel to the Heron Island CoE to undertake research and
engage in BWG group meetings and to attend the International Coral Reef
Symposium in Florida (2008).
85
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Dustin W. Kemp (USA)
PhD student at the University of Georgia (USA)
I am broadly interested in physiology of the coral holobiont (animal + micro-
algae). Coral reef ecosystems are among the most productive habitats on
the planet and support large amounts of biodiversity. At the base of these
ecosystems are very diverse groups of endosymbiotic dinofl agellates in the
genus Symbiodinium. My research focuses on the diversity of Symbiodinium
and how it may relate to holobiont physiology. I work primarily in the
Caribbean and use molecular-genetic techniques to identify the
Symbiodinium associated with reef-building corals. Asking ecological
questions I use photo-physiological techniques to better understand the
symbiotic relationships between corals and their symbionts. My doctoral
work focuses on comparing photo-acclimation and carbon transfer among
genetically diverse Symbiodinium within the same species of coral. These
complex processes are fundamental for understanding holobiont physiology
and may provide important insight about the extent to which corals may
respond physiologically to climate change.
Erika Díaz Almeyda (Mexico)
MSc student at the Universidad Nacional Autónoma de Mexico
I recently received a M.Sc. degree in marine sciences at the Universidad
Nacional Aútonoma of Mexico (UNAM) as part of the CRTR. In addition, I
received training in coral reef research in Curacao, Netherlands Antilles,
sponsored by University of North Carolina at Wilmington USA, CONACyT
and UNAM. My main research interest focuses in the symbioses between
invertebrates and photosynthetic dinofl agellates. My work has been
addressed on the effects of thermal stress in the stability of the photosynthetic
membrane of different symbiotic dinofl agellates. The fi ndings of my study
clearly establish the differences in the membrane fl uidities of the different
symbionts in isolation. I presented my work as an oral presentation on the
11th International Coral Reef Symposium 2008 in Fort Lauderdale, USA. I
recently started a PhD at the University of California under Dr. Monica
Medina supervision to explore the molecular and cellular mechanisms
involved in cnidarian-dinofl agellate symbioses.
Eugenia M. Sampayo (The Netherlands)
PhD student at the University of Queensland (Australia)
I completed my PhD in 2007 on the ecology of coral-symbiont associations
of three common Indo-Pacifi c corals, Stylophora pistillata, Pocillopora
damicornis, and Seriatopora hystrix under natural conditions, thermal
stress, and long-term environmental shifts. The results showed that under
natural conditions each coral species associated with host and depth
specifi c symbionts. I also studied the effects of environmental disturbance
such as thermal stress leading to coral bleaching. I found that patterns of
differential bleaching susceptibility as well as post-bleaching mortality were
related to fi ne-scale variability in symbionts and that changes in symbiont
community diversity were not driven by the uptake of more tolerant
symbiont types but by differential mortality between colonies. Corals did
not acquire novel symbionts during transient bleaching stress or a three-
year transplantation experiment simulating permanent shifts in
environmental conditions. In conclusion, changes in the tolerance limits of
adult corals by acquiring novel symbiont types may be limited, and unlikely
86
to prevent large-scale reef degradation.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
George (Jez) Roff (Australia)
PhD student at the University of Queensland (Australia)
I worked on a BWG research topic as an Honours student and now I am a
PhD candidate. Together with Tracy, I pioneered the fi eldwork which showed
that bleaching is not triggered by Vibrio, and published extensively as a
student (more than 10 papers). My research on `white syndrome', a coral
disease from the Great Barrier, provided insight into the intracolonial
pathways and physiological mechanisms of the disease. Long-term
ecological monitoring of affected colonies suggests that whilst white
syndrome is initiated by high temperature, lesion progression in individual
colonies is not directly related to thermal episodes. More recently I have
research interests focused on the historical ecology of coral reefs, particularly
the trajectories of decline that have been observed in coral reefs throughout
the Caribbean and Indo-Pacifi c region. I use a range of techniques to
investigate the possible synergistic effects of human induced disturbances,
identify changes to coral communities across decadal, centennial and
millennial scales on inshore reefs of the GBR.
Jacqueline Padilla Gamiño (Mexico)
PhD student at the University of Hawaii (Hawaii)
I am currently a graduate student enrolled in a PhD program in the Department
of Oceanography at the University of Hawaii and working in the laboratory of
Dr. Ruth Gates at the Hawaii Institute of Marine Biology. My research focuses
on the reproductive ecophysiology of scleractinian corals from different
biogeographic regions. Specifi cally, I am interested in how reproductive
patterns (fecundity, fertilization, parental investment per ovum and larval
fi tness) can be infl uenced by a coral's exposure and ability to adapt and/or
acclimatize to new environmental conditions. Coral bleaching, in response to
factors such as temperature, salinity and sedimentation can reduce the
reproductive fi tness and infl uence the successful recruitment of future
generations. My research seeks to understand how the coral parent and
offspring can acclimatize in different environments. Having different
physiological and morphological characteristics may increase or decrease the
propensity of bleaching in both, parents and offspring.
Jessica Gilner (USA)
PhD student at the Florida Institute of Technology (USA)
My research has examined the coral assemblages along the northeastern
Yucatan Peninsula, Mexico, and investigated fundamental links between
states (i.e. size-frequency distributions and benthic composition) and
processes (i.e. reproduction, growth and mortality). Focus has been on the
major processes including coral growth, reproduction, partial mortality, and
mortality and their effect on size-frequency distributions. These processes
are not mutually exclusive; reproductive output is affected by partial colony
mortality and growth because they take precedence over reproduction in
resource allocation. Partial mortality affects colony size by taking resources
away from growth, but also by directly shrinking the effective size of the
colony. Furthermore, reproduction is clearly the `backbone' of population
persistence through ecological and evolutionary time and is susceptible to
changes in life history characteristics that are governed by environmental
factors. Therefore, size-frequency distributions coupled with rates of partial
mortality are useful indicators of coral stress and provide insight into the
87
future of reef corals.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Juan Carlos Ortiz (Venezuela)
PhD student at the University of Queensland (Australia)
My PhD is focused on the effect of mild thermal stress on community
dynamics of reef building corals. During the summer of 2006 a mild
bleaching event occurred at Heron Island on the Great Barrier Reef.
The effects of this bleaching on the coral community around Heron Island
were followed for 2 years. The data indicates that the substrate surrounding
corals affects the degree to which thermal stress causes corals to bleach.
Coral identity (taxa) is also important to determine the tolerance to
bleaching and the response of certain taxa to mild thermal stress in
comparison to extreme thermal stress can be highly varied. With these
multiple levels of information an index of sensitivity to thermal stress was
formulated. The study demonstrated that population dynamics and
response of taxa with a high sensitivity can be used as informative early
warning bioindicators of thermal stress.
Juliet Furaha (Kenya)
MSc student at the Moi University (Kenya)
My name is Juliet Furaha Karisa and I hold a Master of Philosophy in
Fisheries Management from Moi University, Kenya. Some of the courses
that I covered are aquatic ecology, research methods, fi sh population
dynamics, systematic ichthyology and ecology and behaviour of fi shes.
Broadly, my thesis research was looking at the population dynamics of
juvenile corals. I was particularly interested in the temporal and spatial
variability of juvenile coral recruitment. To understand these dynamics,
I studied the differences of juvenile coral recruitment at sites with different
habitat characteristics and management levels for 15 months. Overall, the
fi ndings in my study suggest that the stochastic and seasonal dynamics of
larval supply and local habitat characteristics are more important
determinants of juvenile coral dynamics than is site protection.
Leonard Jones Chauka
PhD student at the University of Dar es Salaam (Tanzania)
The main goal of my proposed study is to enhance understanding on the
genetic diversity of Symbiodinium harbored by reef building corals and
their physiological performance in relation to environmental stress. Specifi c
objectives include: 1- To determine geographical distribution and diversity
of Symbiodinium harbored by reef building corals of Tanzania. 2- To assess
effects of seasonality, depth and disturbance intensities on diversity and
distribution of Symbiodinium in common reef building corals of Tanzania.
3- To examine how water chemistry, temperature and light intensities affect
photosynthetic effi ciencies of photosystem II of Symbiodinium harbored by
reef building corals of Tanzania. I visited Dr Lajeunesse lab for approximately
6 weeks to analyze the identity of symbionts in 10 common species of coral
found along the mainland coastline of Tanzania. Building on my intitial
training as an attendee of the Pauly Program in Hawaii, I incroporated
a variety of molecular genetic techniques including PCR-DGGE and
DNA Sequencing.
88
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Luis Alejandro González Guerrero (Mexico)
BSc student at the Universidad Nacional Autónoma of Mexico
I am currently working at Puerto Morelos on my honor's thesis after fi nishing
my undergraduate education in Biology at UNAM. My academic interests
include the effects of climate change on coral communities, and the basic
photobiology of dinofl agellates. My current research is aiming to dissect
the effects of elevated temperature on the photoacclimatory responses of
symbiotic dinofl agellates in culture. I work with three different Symbiodinium
isolates with contrasting evolutionary origin and photosynthetic capacities.
The results of my research indicate that in all cases, thermal stress is
perceived by the symbiotic algae as an increase in light intensity. In addition,
I have been contrasting different analytical techniques such as respirometry
and spectroscopy in an effort to establish the limits of applicability of
common chlorophyll a fl
uorescence approaches for the study of
photoacclimation. I plan to continue my training in biology to understand
the molecular and cellular mechanisms behind coral bleaching.
Mauricio Rodriguez-Lanetty (Venezuela)
Postdoctoral Fellow, University of Queensland (Australia)
My research focused on the use of microarray technology to explore gene
expression under stress in reef-building corals. I was co-supported by the
BWG while I was an ARC funded postdoctoral fellow under the supervision
of Ove Hoegh-Guldberg. I am originally from Venezuela where I obtained
my bachelor degree in Biology in 1994. I moved to Australia in 1997 to
pursue my PhD degree; fi rst at the University of Sydney (1997-1999) and
later at the University of Queensland where I completed my PhD in Marine
Studies in 2002. From 2002 to 2008, I worked as a Postdoctoral Fellow in
several Universities including Ewha Womans University (South Korea),
Oregon State University (in the Weis's lab) and then in the University of
Queensland (Hoegh-Guldberg's lab). I recently moved to a position in the
Department of Biology at the University of Louisiana in Lafayette, USA.
Omri Bronstein (Israel)
PhD student at the University of Tel Aviv (Israel)
My name is Omri Bronstein and I am a PhD student at Professor Yossi Loya's
lab, Tel Aviv University, Israel. As part of the GEF/World Bank targeted
research on coral bleaching and local ecological responses, my study aims
at evaluating the state and assessing the impact of sea urchin populations
on coral communities around the island of Zanzibar. My work is part of a
combined effort to provide a comprehensive view of the state of coral reefs
through examination of the relationship between coral, fi sh and sea urchins.
In the past two years we tracked the changes of sea urchin populations at
six sites around Zanzibar, identifi ed the key urchin species and conducted
bioerosion experiments on the four most dominant urchin species.
Our examination also revealed that one of the most dominant species in
the region should be considered a new species.
89
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Reia Guppy (Trinidad and Tobago)
PhD student at the Newcastle University (UK)
I completed my PhD in 2006 and continued with a 3-year post-doctoral
position with John Bythell at Newcastle. I took up a Faculty position at the
new University of Trinidad & Tobago in August 2009. I use an array of
molecular, cellular and ecological techniques to address a range of
ecological problems. Particular interests are coral host-microbe interactions,
biogeography of marine microbial communities ranging from micro to
macro spatial scales, and how these communities develop on healthy coral
colonies over time. Recent work has compared surface mucus layer microbial
communities across several spatial and temporal scales and followed the
persistence and rate of development of the coral surface biofi lm. I was
supported by the BWG to attend the joint BWG/DWG meeting in Mexico
(2005) and the International Coral Reef Symposium in Florida (2008).
Tracy Ainsworth (Australia)
PhD student at the University of Queensland (Australia)
I was Ove Hoegh-Guldberg's PhD student and worked on the BWG project
until late 2007. I was awarded my PhD in 2007 and I am currently an ARC
Postdoctoral Research Fellow (2008-2010), at the ARC Centre of Excellence
for Coral Reef Studies, James Cook University. My research interests include
stress responses, cell biology, immunity and disease of marine invertebrates.
My current research focuses on investigating the cellular and molecular
responses of corals to environmental stressors as a means to better
understand the impact of climate change and disease in reef ecosystems.
I was particularly productive during the research BWG program, producing
8 publications from this and related work.
William Leggat (Australia)
Postdoctoral Fellow, University of Queensland (Australia)
My research was co-supported by the BWG while I was an ARC funded
postdoctoral fellow under the supervision of Ove Hoegh-Guldberg.
I focused on the all-important symbiotic dinofl agellate Symbiodinium,
particularly on the linkages between gene expression of Symbiodinium to
physiology of the algae and the intact coral holobiont (its host), and
subsequent ecological changes. Research of this type can broadly be called
ecological genomics. In particular, I am interested in how these
dinofl agellates respond to human induced stress, such as climate change,
what effects these changes have on the coral host and how the responses
of the alga effect the future of coral reefs as we know them. I recently took
at position at James Cook University, in Townsville, Australia.
90
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research training
Xavier Enoch Hernández Pech (Mexico)
PhD student at at the Universidad Nacional Autónoma
of Mexico
I am currently writing my PhD dissertation at the Institute for Cell Physiology
at UNAM. My research interest is focused on the responses of the
photosynthetic apparatus of dinofl agellates to different stressful conditions.
The main topic of this research is the characterization of the photoprotective
mechanisms present in symbiotic dinofl agellates of scleractinian corals
using a combination of biochemical and biophysical approaches. My work
describes the effect of light stress on the dial oscillation of the effi ciency of
charge separation of photosystem II (PSII) reaction center and its relationship
to PSII repair cycle. Chronic light stress periods have been described as one
of several key stressors leading to the disruption of the coral/dinofl agellate
symbiotic relationship, characteristic of coral bleaching. I plan to continue
pursuing my academic interest as a postdoctoral fellow in the near future.
91
Workshops and outreach
The Working Group on Bleaching and Local Ecological Factors
(BWG) developed a series of large regional workshops to strengthen
collaborations between Working Groups and Centres of Excellence and
to encompass a strategy to build expert knowledge and capacity for
coral reef management. These meetings were an important opportunity
to share knowledge and extend scientifi c capacity and learning through
encouraging young research scientists and students. The workshops
were also central to making good technical progress toward technologies
that will support management and policy. As a result of the workshops,
the BWG established a strong collaborative network which extends well
beyond the discrete membership of the Working Group and was focused
on linkages and synergies between developed and developing countries.
This was a substantial output for a group of ten scientists.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Workshops and outreach
Workshop 1
Inaugural BWG meeting and fi rst research workshop
Date: May 4 27, 2005
Purpose: The Bleaching Working Group held an
inaugural workshop at the MesoAmerican Centre of
Excellence at Puerto Morelos from 10 May to 3 June
2005. This workshop is seen as the fi rst of many
collaborations between Working Groups and Centres
of Excellence and remains consistent with the capacity
building goals of the Project to provide an ideal
opportunity to "share knowledge and extend scientifi c
capacity and learning" through encouraging young
research scientists and students. Approximately 70
senior scientists, graduate students and post-doctoral
fellows from both developing and developed countries Figure 35. Attendees at the inaugural BWG workshop in
Puerto Morelos, Mexico.
attended the event. The workshop was the fi rst of a
series of workshops designed to galvanise the international scientifi c community around problems,
gaps and solutions with respect to the global issue of coral bleaching and related ecological disturbances
to coral reefs. The workshop was broken into a series of smaller workshops including: Using Pulsed
Amplitude Modulated Fluorescence to detect stress; Diversity, fl exibility, stability, physiology of
Symbiodinium and the associated ecological ramifi cations, Exploration of the Coral and Symbiodinium
genomes, Coral Reef Targeted Research Working Group joint fi eld methods, and integrated research
on coral bleaching and disease. The workshop also conducted a major study of the molecular and
physiological mechanisms underlying thermal stress with the focus being the Caribbean coral
Montastraea annularis.
Location: Puerto Morelos, Meso-American CoE, Mexico.
Number of Participants: 70
Workshop 2
A major student training workshop
for research skill development
Date: July 26 August 11, 2005
Purpose: Training workshop for 8 advanced
undergraduate students from Indonesia on methods
for understanding stress on coral reefs and to attend
the Australian Coral Reef Society annual meeting.
The workshop involved training in library research and
writing science, as well as hands-on research at Heron
Island Research Station. Three students from this
course have begun higher degrees.
Location: Heron Island, Australasian CoE, Australia.
Figure 36. Ms Lely Fika Anggraini undertaking fi eld
Number of Participants: 8
work as part of the research training workshop in Heron
Island, 2005.
93
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Workshops and outreach
Workshop 3
Meeting on fi eld methods for the CRTR Program:
toward commonality and complementarity
Date: November 6 7, 2005
Purpose: Discuss how we can facilitate interaction among working groups, identify key process variables
and fi nalize selected parameters and methods; gathering to establish a complementary approach to
fi eld methods and data collection.
Location: Melbourne, Florida, USA
Number of Participants: 8
Workshop 4
BWG Research workshop
Date: January 2 February 16 2006
Purpose: Undertake research focused on answering fundamental mechanisms of coral bleaching
and mortality.
Location: Heron Island, Australasian CoE, Australia
Number of Participants: 18
Workshop 5
BWG Research workshop Remote sensing and thermal thresholds
Date: March 2006
Purpose: The team had a three week experimental workshop, followed by a video conference link up
which was held in Brisbane.
Location: Heron Island, Australasian CoE, Australia
Number of Participants: 18
Workshop 6
BWG Annual meeting
Date: April 8 9, 2006
Purpose: Review of funding activities and reporting
update. Discussion on fi
rst year activities and
outcomes. Defi ne position for the next 4 years.
Location: UNESCO-IOC, Paris
Number of Participants: 13
Figure 37. Member participants during the BWG annual
meeting in Paris, 2003. From left to right: Y. Loya,
R. Iglesias-Prieto, D. Obura, R. Johnston, O. Hoegh-
Guldberg, T . McClanahan, R. Gates, M. Lesser. W. Fitt,
R. van Woesik, J. Bythell, H. Chin and O. Vestegaard.
94
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CRTR Working Group Findings 2004-2009
Workshops and outreach
Workshop 7
Training workshop/course on coral
reefs and environmental change
Date: July 9 11, 2006
Purpose: A training course for Indonesia and West
Papua students was run at the University of Diponegoro
in order to discuss signifi cant coastal and coral reef
issues.
Location: Semarang, Indonesia
Figure 38. Students and Rector (left) at the University of
Diponegoro and Ove Hoegh-Guldberg (right)
Number of Participants: 45 students
Workshop 8
BWG Research workshop on meso-scale effects of coral bleaching
benthic-fi sh interactions
Date: November 28 December 1, 2006
Purpose: The workshop focused on benthic-fi sh-fi shing interactions and the medium-term (3-10 years)
effects of coral bleaching and mortality on these interactions and the coral reef ecosystem. Several
major reviews have been generated from this meeting.
Location: Zanzibar, East African CoE.
Number of Participants: 17
Workshop 9
BWG Research workshop
Date: January 22 27, 2007
Purpose: BWG/NSF/ARC workshop on Heron island
"New frontiers in cellular interactions in Cnidarian/
dinofl agellate symbiosis" NSF/ARC proposal (Weis,
Hoegh-Guldberg, Pringle, Davy; $140k from NSF).
(BWG supported 5 scholars to attend from Mexico,
Kenya, Iran, and Taiwan).
Figure 39. Participants at Workshop 9 (supported by
Location: Heron island, Australasian CoE
BWG/NSF/ARC) at Heron Island, Australia
Number of Participants: 57
Workshop 10
BWG Research workshop
Date: July 30 August 3, 2007
Purpose: BWG supported workshop responding to climate change: a workshop for reef managers.
Lady Elliot Island, Southern GBR
Location: Australasian CoE
95
Number of Participants: (Supported 9 managers to attend; $10k)
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Workshops and outreach
Workshop 11
BWG Research workshop
Date: April 16 26, 2007
Purpose: "Science for management: Understanding and protecting East Africa's coral reefs." Workshop
involved BWG members as well as scholars and students from South Africa, Kenya and Tanzania.
Three days of presentations and seminars followed by 8 days of research. Several key papers were
generated as a result of this interaction.
Location: Zanzibar, East African CoE.
Number of Participants: 25
Workshop 12
Molecular techniques workshop
Date: June 2 July 27, 2007
Purpose: The BWG coordinated and taught the Edwin
W. Pauley Summer Program in Marine Biology ("The
Biology of Corals: Developing a Fundamental
Understanding of the Coral Stress"). This 6 week
program focused on developing research capacity in
the biology of corals and examining the biology
underlying stress responses. (see details at http://
www.hawaii.edu/HIMB/Education/pauley2007.html)
The BWG contributed $45,000 of the $162,000 budget
to run this program. The 15 student participants were
selected through a competitive application process
from a pool of over 70 applicants from 27 countries. Figure 40. Ruth Gates and students during the 2007
The BWG funding supported the participation of four Edwin W. Pauley Summer Program in Marine Biology,
developing country students, six BWG members as Hawaii.
faculty in the program - Ruth Gates (Lead PI), John
Bythell, David Obura, Roberto Iglesias Prieto, Ove Hoegh Guldberg and Michael Lesser and Jackie
Padilla-Gamino, the GEF PhD candidate being trained in Hawaii. In addition to the BWG faculty,
students were taught by an additional 10 coral biology experts (see website for details). Two short
workshops were embedded in the program to expose students to management relevant science.
Location: Hawaii Institute of Marine Biology, Hawaii, USA.
Number of Participants: 15 (+ 22 lecturers/research leaders)
Workshop 13
Developing a temperature-light satellite product for predicting
coral bleaching impacts
Date: June 24 26, 2009
Purpose: Collaboration between RSWG and BWG aimed at refi ning an algorithm that uses light and
temperature to predict the impact and outcome of mass coral bleaching events.
Location: HIMB, Hawaii.
Number of Participants: 12
96
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CRTR Working Group Findings 2004-2009
Workshops and outreach
Workshop 14
BWG Research workshop on
common sampling methods
Date: October 3 7, 2007
Purpose: Defi ne common-fi eld sampling protocols for
working groups at the CoE within the CRTR Program
Location: Florida Institute of Technology, Florida, USA
Number of Participants: 10
Figure 41. BWG students and Yossi Loya (front centre)
and Rob van Woesik (back centre) in the sampling
methodologies workshop.
Workshop 15
BWG Annual meeting
Date: December 18 20, 2007
Purpose: Present work to-date and set budget and work plan for 2008
Location: Amsterdam, The Netherlands
Number of Participants: 13
Workshop 16
BWG Microbial ecology workshop
Date: May 5 16, 2008
Purpose: Training workshop for students on microbial
ecology techniques. Regional capacity building
Location: Zanzibar, East African CoE.
Number of Participants: 17
Figure 42. John Bythell and Ron Johnstone (front) and
participants in the microbial ecology workshop for
Western Indian Ocean and East African participants,
Zanzibar CoE, May 2008.
Workshop 17
BWG Annual meeting
Date: July 13 14, 2008
Purpose: Discuss progress, Phase 2 Working Group activities, budgets and personnel.
Location: Fort Lauderdale, Florida, USA.
Number of Participants: 13
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Workshops and outreach
Workshop 18
BWG meeting and research workshop
Date: May 17 30, 2009
Purpose: Seminars to present the most recent results.
Review, analyse and write up the project activities from
the preceding 4-5 years. Focus on two major writing
tasks: (1) major academic contributions aimed at
synthesising the research results from past fi ve years,
and (2) public outreach documents aimed at local
managers, government agencies and scientists. Also
produce a number of small videos and interviews on
BWG activities for target audiences.
Location: Heron Island, Australasian CoE, Australia.
Figure 43. Participants at the fi nal meeting and BWG
Number of Participants: 25
workshop 18 on Heron Island, Australia.
98
Conclusions and
future research
The fi rst fi ve years of research has been highly successful in terms
of achieving the goals set by the original BWG research plan.
Many of these physiological and ecological questions have
been answered. These answers lead naturally to other areas of
investigation, which will yield important new insights into the
basic processes underpinning coral reefs and their response to
rapid global change.
Photo: D. Obura
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Conclusions and future research
Beyond the four research themes
We now have a much better understanding of the diversity and fl exibility of coral-Symbiodinium associations
as a result of the fi rst fi ve years of investigation within Theme 1: Coral-symbiont responses to thermal
stress. The notion that symbiosis is fl exible enough to allow the evolution of new symbioses with higher
thermal tolerances has been disproved. While there is evidence for shuffl ing of existing symbiont varieties
(e.g., acclimatization) in the fi eld, there is no evidence of host corals switching their existing symbionts for
truly novel varieties. This leads to the conclusion (which is borne out by a large amount of ecological work)
that symbiosis between corals and Symbiodinium are unlikely to be able to shift their thermal tolerance
rapidly enough over the time frames of predicted increases in temperatures. Consequently, projections
that rising sea temperatures will lead to an increase in mass coral bleaching and mortality remain the most
credible conclusion regarding the future of coral reefs under rapid anthropogenic climate change.
Patterns associated with the genetic diversity of Symbiodinium are beginning to become coherent. While
particular host species of corals tend to have the same sub-clades across most of their distribution, they
often have quite different subclades at the extreme north or south of the distribution. Questions regarding
how quickly these new varieties of symbiosis have arisen and how they function within these extreme
environments should be a major focus for future research.
Research undertaken within Theme 1 has led to a series of new perspectives on the diversity of symbionts
and close associates of reef-building corals. One of the key fi ndings of the current project has been that
corals and dinofl agellates are only two of the many organisms which are interacting to form the coral
holobiont. While the function of most of the bacteria species on the surfaces of corals has yet to be
identifi ed, the discovery of the functional N-fi xing bacteria within the tissues of corals indicates that many
of these bacteria are likely to have key physiological roles within the coral holobiont. In addition to
discovering a series of apparently benign bacterial symbionts, it is clear that the integrity of the coral
surface (particularly the mucus layer) is critical to the maintenance of disease free states in reef-building
corals. Understanding these relationships, particularly the role and function of mucus and other immune
responses of corals, will be particularly important given recent observations of an increase in coral disease
and linkage of this phenomenon to ocean warming.
Theme 2 within the BWG work plan focused on relating responses measured at the organism, population
and ecosystem levels to ecological outcomes. A number of projects focused in on stony corals, algae, sea
urchins and fi sh species diversity and community structure, as well as their population dynamics under
environmental change, and the effects of bleaching on coral populations within regions, such as the
Western Indian Ocean. These studies have identifi ed a number of subtle ecological changes which suggests
that changes to coral reefs occur prior to the appearance of mass mortality. This observation suggests that
understanding and detecting these changes, and relating them to broad-scale physiological phenomena,
such as primary productivity and calcifi cation will be important in future studies. These types of changes
currently tend to fall under the radar of reef managers, yet are likely to be fundamentally important in
detecting their impact on community compositions and functional relationships of coral reefs fauna and
fl ora. Further research in this area should also be a major priority.
Work done as part of Theme 3 (Biomarkers) has opened up an enormous set of opportunities to develop
further biomarkers for detecting and distinguishing different types of environmental stress. In this regard,
the discovery of around 100 stress protein candidates (many new to corals) from the microarrays studies
opens up signifi cant opportunity for future investigation. Understanding the function of each of these
protein candidates, and how the expression of these proteins relates to the type and intensity of
environmental stress, will help defi ne how these important tools can be used by reef scientists and managers
in the future. Being able to create less expensive technologies accessible to the developing world will be
an important criterion for the development of these potentially useful tools for reef managers.
100
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Conclusions and future research
The last part of the BWG research plan was to take the knowledge from the fi rst three themes and to
incorporate these into credible projections of the future. In this respect, some progress has been made in
terms of linking the physical, chemical and biological changes to the socioeconomic and political consequences.
The recent multidisciplinary study within the Coral Triangle undertaken by members of the BWG has
highlighted a series of important ramifi cations of losing coastal ecosystems under rapid changes in climate.
One of these projections is the potential likelihood that the 100 million people that live in the coastal zone
within the Coral Triangle are likely to see increased poverty and downwardly spiraling food security. While this
has been done for the Coral Triangle, the next set of questions should focus on refi ning the level of precision
for understanding these linkages, and extending them to other regions. In this respect, the work by BWG
member Dr Tim McClanahan and others has already begun to bring important synthesis to our understanding
of how climate change, coral reefs and people are linked within the Western Indian Ocean.
101
Research themes
for the future
Photo: T. McClanahan
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Research themes for the future
Coral reefs are clearly facing a very diffi cult time as sea temperatures and acidity increase under the pressure
of rising atmospheric carbon dioxide and other greenhouse gases. This leads to a number of conclusions.
The fi rst is that the current decline in reef-building corals on reefs across the planet (Bruno and Selig 2007)
is likely to continue. The second is that reefs are likely to have less reef-building coral on them (Hoegh-
Guldberg et al. 2007a). The third is that the majority of tropical reef systems are likely to have very different
community compositions and functional relationships. Understanding how these reef systems are likely to
function at the ecosystem level should be a priority of future research.
In this respect, the BWG is proposing a new focus on Reef Processes under Rapid Climate Change
(RESERCC) in which understanding changes to primary productivity and carbonate accretion would form
the unifying theme. These particular processes link directly into food security and human well-being. For
example, it is an urgent priority that we understand how the productivity of coral reefs is likely to change
as reef-building corals dwindle and other organisms such as macroalgae become more dominant within
tropical reef communities. How these changes affect fi sheries and other resources available to human
communities in tropical coastal areas would form an important part of this research program.
Similarly, focusing on how calcifi cation, erosion and carbonate accretion are going to change as oceans
warm and acidify will also form a critical focus of this new research project. Understanding how rapidly
carbonate frameworks will disintegrate (or not) under changes to the rates of calcifi cation and erosion will
be enormously useful to nations across the world's tropical regions who are trying to plan their responses
to climate change. Equally, how these changes to the three-dimensional structure of coral reefs will affect
the key reef ecosystem services will be critical for understanding how food security and human well-being
may change in the future.
Measuring and understanding these ecological processes as part of RESERCC will require a multidisciplinary
approach, which appears ideally suited to the Coral Reef Targeted Research (CRTR) Program and the
scientifi c expertise of the BWG. This new focus will draw heavily on the fi rst fi ve years of research undertaken
by the BWG and other Working Groups within the CRTR Program. This focus is also expected to drive a
reconstitution and possible expansion of the Working Groups within the CRTR. Considering this emergent
research concept, the BWG will transform into a research group that is focused on providing organismal,
population, and ecosystem level models for how primary productivity, element cycles and carbonate
balance of coral reefs is likely to change as carbon dioxide and other greenhouse gases continue to increase
in the earth's atmosphere. In particular many coral reefs around the world have changed in their structure
to "algal" dominated communities, while others have not. At a basic level the BWG would ask how are
productivity, element cycles and calcifi cation rates of these new "reefs" compare to those former reefs,
which were dominated by corals. When shifts to algal dominated communities occur what coral reef
ecosystem services are lost, or gained? What are the interactive roles that local anthropogenic stressors
(e.g., eutrophication) play when coral reefs are faced with the effects of global climate change? The answers
to these questions will continue to be the Working Group's fundamental premise that understanding the
basic biology and ecology of corals leads to practical answers to applied questions that can be used by
local communities and managers.
103
Invited presentations
Over the past fi ve years, the BWG members, researchers
and students gave more than 200 presentations in
numerous meetings around the world. This involved
about 65 different institutions and universities from
18 countries. Here we listed only the major international
meetings and conferences in which our results
were presented.
Photo: E. Brokovich
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
2009
Bythell J. The consequences of catastrophic events. Keynote address, 44th European Marine Biological
Society meeting, Liverpool, United Kingdom.
Gates R. Evolutionary and Ecological Genetics. EPSCoR National Conference, Hawaii Institute of Marine
Biology, Honolulu, Hawaii.
Hoegh-Guldberg O. Coral reefs and climate change: Is there any hope for coral reef ecosystems? Workshop:
Responses of Coral Holobionts under the Impact of Climate Change: Symbiont Diversity, Coral Bleaching,
Diseases, and Ocean Acidifi cation. Plenary speaker. Tapei, Taiwan June 22.
Hoegh-Guldberg O. Coral reefs, evolution and climate change. Workshop: Responses of Coral Holobionts
under the Impact of Climate Change: Symbiont Diversity, Coral Bleaching, Diseases, and Ocean Acidifi cation;
Invited speaker. Tapei, Taiwan June 23.
Hoegh-Guldberg O. Coral reefs, symbiosis and Koyaanisqatsi. Invited speaker, Archilife Research
Foundation, Tapei, Taiwan June 27.
Hoegh-Guldberg O. Oceans of Change: Why we must achieve fi rm action on CO emissions in Copenhagen.
2
Invited Speaker, Australian Education International, Tapei, Taiwan June 23.
Hoegh-Guldberg O. Coral reefs and Rapid Climate Change: Impacts, Risks and Implications for Tropical
Societies. International Scientifi c Congress on Climate Change, University of Copenhagen, March 12-14.
Hoegh-Guldberg O. The Coral Reef Crisis. Invited lecture to EarthStock Day at Stony Brook University, New
York, USA.
Hoegh-Guldberg O. 450 ppm or bust: Copenhagen, climate change and the future of the earth's biosphere.
Invited speaker, Woods Institute, Stanford University.
Hoegh-Guldberg O. Climate change and our climate. Invited speaker, Blue Visions Summit, Washington
DC, March.
Hoegh-Guldberg O. Coral reefs in a rapidly heating and acidifying global ocean: reasons for hope and
strategies for survival. World Ocean Congress, Manado, Indonesia May 11-15.
McClanahan T. Adaptation for tropical coral reef ecosystems in the face of climate change. Congressional
staff lunch briefi ng, Wildlife Conservation Society, New York, USA May 20.
Padilla-Gamino J. The infl uence of parental conditions on coral offspring: are all gametes created equal?
Best student paper award. STAR Student Symposium Department of Oceanography, University of Hawaii
at Manoa. USA.
Wild C. Biogeochemical research approaches to understand coral reef engineering. Public talk at Institute
de Ciéncies del Mar (CSIC), Barcelona, Spain.
Wild C. Research approaches to understand coral reef engineering and functioning in a time of change".
Public talk at Center for Tropical Marine Ecology (ZMT), Bremen, Germany.
105
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
2008
Ainsworth T, Hoegh-Guldberg O. Coral-bacterial associations vary under environmental and experimental
conditions. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Ateweberhan M, McClanahan T. Historical sea-surface temperature variability predicts climate change-
induced coral mortality. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Bongaerts P, Englebert N, Ridgway T, Riginos C, Hoegh-Guldberg O*. Genetic connectivity of the shallow
and deep reef: intra-reef genetic structure of Seriatopora hystrix on the northern Great Barrier Reef. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Bongaerts P, Bridge T, Sampayo E*, Englebert N, Ridgway T, Rodríguez-Lanetty M, Webster J, Hoegh-
Guldberg O*. Diversity of Symbiodinium in mesophotic coral communities on the Great Barrier Reef. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Bronstein O, Loya Y. The sea urchins of Zanzibar and their effect on local coral communities. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Bythell J*, Guppy R*, Jatkar A*, Brown B, Morris N, Pearson J. Visualising the coral surface mucus layer.
11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Bythell J. Reef Corals: healthy or snot? Keynote address, Reef Conservation UK Meeting, Zoological Society
of London, London, United Kingdom.
Bythell J. Coral reef bleaching events, microbial communities and climate change. Invited Plenary, Society
for General Microbiology, 162nd Ordinary Meeting, `Hot Topics' Symposium on Infl uence of Climate
Change on Disease and Microbial Environmental Processes, Edinburgh, United Kingdom.
Desalvo M, Voolstra C, Weil E, Andersen G, Iglesias-Prieto R*, Medina M. Bacterial Community and Gene
Expression Profi ling Using 16srrna Gene and CdnaMicroarrays: Introduction of a Dual High-Throughput
Approach to the Study of Coral Disease and Bleaching. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Díaz-Almeida EM*, Iglesias-Prieto R*, Thomé PE. Differential Stability of the Photosynthetic Membrane of
Symbiotic Dinofl agellates in Response to Elevated Temperature. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Díaz-Pulido G, Anthony KRN, Kline DI, Mccook L, Ward S, Hoegh-Guldberg O*, Dove S*. Effects of climate
change on coral reef algae: will algae be the winners? 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Enriquez S, Mendez E, Hoegh-Guldberg O*, Iglesias-Prieto R*. Morphological Dependence of the Variation
in the Light Amplifi cation Capacity of Coral Skeleton. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Fitt W*, Kemp D*, Hernandez-Pech X*, Iglesias-Prieto R*, Mccabe J, Shannon T, Bruns B, Schmidt G.
Bleaching, El Niño, and la Niña: 13 years of seasonal analysis of reef-building corals in Florida, the Bahamas,
and the Caribbean. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Gates R. Comparison of endosymbiotic and free-living Symbiodinium diversity in a Hawaiian reef
environment. Western Society of Naturalists, Vancouver, Canada.
Gates R. Developing tools for monitoring coral health. Joint Symposium (with university of Hawaii) on
Ocean and Coastal Sciences, University of Tokyo, Japan.
Gates R. Do corals possess the biological fl exibility to survive global climate change?. The Omics in Ocean
International Symposium for Marine Biotechnology, National Museum of Marine Biology and Aquarium
(NMMBA), Taiwan.
Gates R. How fl exible is the biology of corals? Long Term Ecological Research, Joint Taiwan US Symposium,
Taiwan Coral Research Center, Taiwan
106
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
Gilner J, van Woesik R. Partial mortality of Caribbean corals: modes, trends, and consequences. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Goulet T, LaJeunesse T*, Fabricus K. Symbiont specifi city within and among soft coral genera during the
1998 GBR mass coral bleaching event. 11th International Coral Reef Symposium, Fort Lauderdale, USA
July 7-11.
Guppy R, Bythell J. Biofi lms: coral surface mucus layers, settlers and their bacterial inhabitants. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Haas A, Naumann M, Mayer F, Mayr C, el-Zibdah M, Wild C*. Organic matter release by coral reef associated
benthic algae - Implications for in-situ oxygen dynamics. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Hernandez-Pech X*, Iglesias-Prieto R*. In Hospite Operation of the Photosystem II Repair Cycle in Symbiotic
Dinofl agellates. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Hind E*, Lindop A, Bythell J*. The unknowns in coral disease identifi cation: an experiment to assess
consensus of opinion amongst experts. 11th International Coral Reef Symposium, Fort Lauderdale, USA
July 7-11.
Hoegh-Guldberg O. Invited Key Note speech for opening of King Abdullah University of Science and
Technology (KAUST) Symposium - "The Sustainability of Coral Reefs Faced by Unprecedented Environmental
Change", Jeddah, Saudi Arabia.
Hoegh-Guldberg O. Is 500 ppm CO and 2°C of warming the `tipping point' for coral reefs? If so, how
2
should we respond? 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Hoegh-Guldberg O. Coral reef ecosystems, climate change and human societies. Key Note Address to the
World Bank's Environment Sector Board, Washington DC, USA.
Hoegh-Guldberg O. Keynote address "Coral reefs and global change". AAAS Annual Meeting in Boston
on "Global Interactions between Climate Change and Microbial Activity." Boston MA, USA.
Hoegh-Guldberg O. Coral reefs and ocean acidifi cation. Invited lecture given as part of the public
symposium What's Killing the Coral Reefs? at the Marian Koshland Science Museum Coral Reefs Program,
Washington DC, USA.
Hoegh-Guldberg O. Invited keynote address. Climate change, coral bleaching and the future of the world's
coral reefs. International Symposium on the Effects of Climate Change on the World's Oceans, Gijón, Spain
May 19-23.
Iglesias-Prieto R. Photophysiology, Bleaching and Adaptation. Plenary speaker. 11th International Coral
Reef Symposium, Fort Lauderdale, USA, July 7-11.
Jatkar A*, Bythell J*, Brown B, Pearson J, Morris N, Guppy R*. Do corals possess the protective mucus
encoding muc genes? 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Jupiter S, Marion G, Rof G*, Henderson M, Schrameyer V, Mcculloch M, Hoegh-Guldberg O*. Linkages
between coral assemblages and coral-based proxies of terrestrial exposure along a cross-shelf gradient of
the Great Barrier Reef. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Kaniewska P, Campbell P, Fine M, Hoegh-Guldberg O*. Phototropic growth and molecular basis for axial
polyp differentiation in the branching coral Acropora aspera. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Kemp D*, Hernandez-Pech X*, Iglesias-Prieto R*, Schmidt G, Fitt W*. .Micro-Niche Partitioning and the
Photobiology of Symbiodinium Associated with Montastraea faveolata. 11th International Coral Reef
Symposium, Fort Lauderdale, USA July 7-11.
Kline DI, Anthony KRN, Díaz-Pulido G, Dove S*, Ward S, Hoegh-Guldberg O*. Impacts of Ocean Acidifi cation
and Warming on Calcifying Coral Reef Organisms. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
107
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
Kongjandtre N, Rodríguez-Lanetty M, Ridgway T, Hoegh-Guldberg O*. Resolving the Taxonomy of Favia
Corals from Thai Waters using Morphological and Molecular Data. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Kuguru B, Nanette E. Chadwick C, Achituv Y, Dove S*, Hoegh-Guldberg O*, Tchernov D. Mechanisms of
microhabitat segregation among corallimorpharians: Evidence from physiological parameters related to
photosynthesis and host cellular response to irradiance. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Leggat W*, Yellowlees D, Dove S*, Hoegh-Guldberg O*. Gene Expression in Symbiodinium Under Stress.
11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Levy O, Appelbaum L, Leggat W*, Gothilf Y, Hayward D, Miller D, Hoegh-Guldberg O*. Light-Responsive
Cryptochromes from a Simple Multicellular Animal, the Coral Acropora millepora. 11th International Coral
Reef Symposium, Fort Lauderdale, USA July 7-11.
Loya Y. Bidirectional sex change in fungiid corals. 11th International Coral Reef Symposium, Fort Lauderdale,
USA July 7-11.
Loya Y. The Coral Reefs of Eilat-past present and future. First International Congress Documenting,
Analyzing and Managing Biodiversity in the Middle East, Aqaba, Jordan.
Marshall J, Logan D, Siebeck U, Hoegh-Guldberg O*, Joanne Marston, Jenny Miller Garmendia, Ania
Budziak. CoralWatch: A Flexible Coral Bleaching Monitoring Tool for You and Your Group. 11th International
Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Mayer F, Naumann M, Haas A, Mansareh R, Wild C*. Coral mucus creates a short-linked energy and nutrient-
cycle via particle trapping in fringing reefs of the Northern Red Sea. 11th International Coral Reef
Symposium, Fort Lauderdale, USA July 7-11.
Mayer F, Duewel S, Haas A, Jantzen C, Naumann M, Jeschke JM, Wild C*. A web-based information
management solution for experimental data from the fi eld of coral reef ecology. 11th International Coral
Reef Symposium, Fort Lauderdale, USA July 7-11.
McClanahan T*, Ruiz Sebastian C, Cinner J, Maina J,.Wilson S. Managing fi shing gear to encourage
ecosystem-based management of coral reefs fi sheries. 11th International Coral Reef Symposium, Fort
Lauderdale, USA July 7-11.
Mcdonald C, Dunbar R, Koseff J, Monismith S, Hoegh-Guldberg O*, Reidenbach M. Large-scale, In-situ
Measurements of Coral Reef Community Metabolism Using an Integrated Control Volume. 11th International
Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Meisel J, Reef R, Rodríguez-Lanetty M, Dove S*, Hoegh-Guldberg O*. The Role of Oxidative DNA Damage
and Repair in Cnidarian-Dinofl agellate Symbiosis Breakdown. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Mukherjee M, West L, Lasker H, Schmidt G, Fitt W*. Antioxidant activity of extracts and secondary
metabolites from Pseudopterogorgia spp. 11th International Coral Reef Symposium, Fort Lauderdale, USA
July 7-11.
Naumann M, Mayr C, Wild C*. Coral mucus stable isotope composition and labeling. 11th International
Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Ortiz J*, Gomez-Cabrera M. Coral holobiont community structure: How much have we
missed by focusing only in the coral host?. 11th International Coral Reef Symposium, Fort Lauderdale, USA
July 7-11.
Padilla-Gamino J, Gates R. The Infl uence of Size, Morphology and Parental Conditions on Coral Reproductive
Outputs. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Padilla-Gamino J, Gates R. Exploring coral reproduction in the fi eld: do size and morphology infl uence the
reproductive output of the hermatypic coral Montipora capitata (spawner)?. 88th Western Society of
Naturalists Annual Meeting. Ventura, California, USA. Honourable mention for best student paper award.
108
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
Palmer C*, Bythell J*, Willis B. Pigmentation as part of a general immune response in Scleractinians. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Reef R, Dove S*, Carmi M, Mooney A, Kaniewska P, Levy O, Hoegh-Guldberg O*. Climate change can
supersensitise corals to natural levels of ultra violet radiation. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Rodríguez-Lanetty M, Harii S, Hoegh-Guldberg O*. Thermal regulation in coral larvae: a microarray
screening. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Rosic N, Rodríguez-Lanetty M, Leggat W*, Hoegh-Guldberg O*. Effect of irradiance and increased
temperature on differential gene expression in dinofl agellate. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Siboni N, Ben-Dov E, Sivan A, Hoegh-Guldberg O*, Kushmaro A. Global diversity and distribution of coral
associated Archaea and the possible role in coral nitrogen cycle. 11th International Coral Reef Symposium,
Fort Lauderdale, USA July 7-11.
Skirving W, Iglesias-Prieto R*, Enriquez S, Christensen T, Hedley J, Eakin M, Ove Hoegh-Guldberg O*,
Dove S*, Heron S, Mumby P, Strong A, Liu G, Morgan J, Gledhill D. A methodology for using satellite-
based temperature and light measurements for predicting coral bleaching severity and mortality. 11th
International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Smith R, LaJeunesse T*. Prevalence of background populations of an opportunistic Symbiodinium among
Caribbean coral communities. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
van Woesik R. Characteristics of marine climate sensitive species: coral reefs. Florida Summit of climate
sensitive species, Orlando, Florida, USA:
van Woesik R. Coral reef resilience in the face of global climate change: conceptual framework for the
application of resilience principles to coral reef conservation. The Florida Reef Resilience Program, Key
Largo, USA.
van Woesik R. Vital processes structuring coral reef assemblages: implications for management. Endangered
Acropora species in the Caribbean, Cancun, Mexico.
Ward S, Dove S*, Kline D, Anthony K, Hoegh-Guldberg O*. Ocean Acidifi cation changes the early life
history of scleractinian corals. 11th International Coral Reef Symposium, Fort Lauderdale, USA July 7-11.
Wicks L, Sampayo E*, Gardner J, Hoegh-Guldberg O*, Davy S. High Symbiodinium diversity at high-
latitude reef sites - a means of survival in the face of climate change? 11th International Coral Reef
Symposium, Fort Lauderdale, USA July 7-11.
Wild C*, Naumann M, Haas A, Mayr C. Phase shifts in coral reefs comparative investigation of corals and
benthic algae as ecosystem engineers. 11th International Coral Reef Symposium, Fort Lauderdale, USA
July 7-11.
Zvuloni A*, Artzy-Randrup, Stone L, van Woesik R*, Loya R*. Ecological count-based measures: how to
prevent and correct biases in spatial sampling. 11th International Coral Reef Symposium, Fort Lauderdale,
USA July 7-11.
109
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
2007
Bythell J. Microbial intermediates of bleaching mortality. Centre for Marine Sciences (CMS), Departmental
seminar series, University of Queensland, Australia.
Fitt W. A post-El Niño spike in zooxanthelae density what does it mean?" Coral Reef Targeted Research
and Capacity Building for Management Workshop, Institute for Marine Science, Zanzibar
Gates R. Corals and the environment. Marine Science Seminar Series, California State University Fresno,
USA
Gates R. How fl exible is the biology of corals? Departmental Seminar Series. Lehigh University, Pennsylvania,
USA.
Gates R. Unveiling Taxonomic and Functional diversity on Symbiodinium-Coral Associations. All Scientists
Meeting Moorea Coral Reef LTER, University of California, Santa Barbara, USA.
Hoegh-Guldberg O. Coral reefs and the impacts of rapid warming and acidifi cation. Dutch Coral Research
Symposium, Amsterdam, Netherlands
Iglesias-Prieto R*, Enríquez S. Determining algal absorptance from intact coral surfaces. AquaFluo
Chlorophyll fl uorescente in Aquatic Sciences Meeting. Nove Hrady, Czech Republic.
Iglesias-Prieto R. Simbiosis entre dinofl agelados y corales: perspectivas actuales. IV Congreso Mexicano de
Arrecifes Coralinos. La Paz B.C.S., Mexico.
Iglesias-Prieto R. Lessons from the Yucatán and what the future might bring if we don't act now. Future
Leaders Forum, Brisbane, Australia.
Iglesias-Prieto R. The photobiology of coral bleaching. Dutch Coral Research Symposium. Amsterdam,
Netherlands.
Jupiter S, Marion G, Roff G*, Henderson M, Schrameyer V, Hoegh-Guldberg O*. Linkages between coral
assemblages and coral-based proxies of terrestrial exposure along a cross-shelf gradient of the Great
Barrier Reef. Annual Australian Coral Reef Society Conference, Fremantle, Western Australia.
LaJeunesse T. Coral Zooxanthellae as a model system for examining eukaryotic microbial evolution.
Smithsonian Marine Station at Ft. Pierce, January 12.
McClanahan T. Status and Future of Indian Ocean Coral Reefs. Fifth Scientifi c Symposium of the Western
Indian Ocean Marine Science Association WIOMSA, Durban, South Africa
McClanahan T*, Cinner JE, Maina J,. Graham NAJ, Daw TM, Stead SM, Wamukota A, Brown K, Ateweberhan
M *, Venus V, Polunin NVC. Conservation action in a changing climate Society for Conservation Biology
Meeting, Pt. Elizabeth, South Africa July 1-6.
Padilla-Gamino J. Sedimentation Effects on the Physiological status of P. rus in Moorea, French Polynesia.
MCR LTER All Investigators Meeting. Santa Barbara, California, USA.
van Woesik R. Review of contemporary issues on coral reefs. Palau, Micronesia
Wild C. Cold water corals as engineers of their reef ecosystem. ESF Eurodiversity 1st programme conference,
Paris, France.
Wild C. Corals shaping reefs in the deep. Dutch Coral Research Symposium, Amsterdam, Netherlands.
Wild C. The role of warm and cold water corals as ecosystem engineers. Talk within the interdisciplinary
seminar of the LMU master program for Evolution, Ecology and Systematics (EES), Martinsried, Germany.
110
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
2006
Ainsworth T, Hoegh-Guldberg O. Pathology and Microbial Ecology in Coral Disease and Bleaching. ACRS
conference, Abstract, Mission Beach QLD, Australia.
Brown B, John Bythell*. Convenors: Stress responses in corals. International Society for Reef Studies,
European Meeting, Bremen, Germany.
Bythell J*, Johnstone R*, Pantos O. Microbial mediation of coral reef responses to environmental stress.
Society for Experimental Biology (SEB), Symposium on Climate Change Effects on Coral Reefs, University
of Kent at Canterbury.
Bythell J*, Johnstone R*, Pantos O. Microbial mediation of coral reef responses to environmental stress.
Workshop on coral bleaching and local indicators of climate change on coral reefs, UNESCO, Paris
Bythell J. Coral bleaching and disease: stress, pathogens, or a little of both? Department of Biology,
Departmental Seminar series, University of Exeter, United Kingdom.
Fitt W. Thermal history of Caribbean reef corals. Society for Experimental Biology Annual Meeting,
Canterbury, United Kingdom.
Gates R. Do corals possess the biological fl exibility to survive global climate change?. International
Symposium on Marine Environmental Research, Japan.
Gates R. The molecular biology of thermal stress in Symbiodinium. Society for Experimental Biology Annual
Meeting, Canterbury, United Kingdom.
Hoegh-Guldberg O. Complexities of climate change for coral reefs: what are the key questions? ACRS
conference, Abstract, Mission Beach QLD, Australia.
Hoegh-Guldberg O. The Great Barrier Reef at risk? Plenary talk at the Davos leadership retreat, Hayman
Island Resort, Australia August 26.
Hoegh-Guldberg O. Address to Rio Tinto Board on Coral Reefs and Climate Change, Rio Tinto, London.
May 10.
Hoegh-Guldberg O. Chairman's Panel, leadership retreat on Coral Reefs, Orpheus Island, May 24.
Hoegh-Guldberg O. Climate Change and Coral Reefs: Time frames, growing risk and indecision, National
University of Mexico, Mexico, December 11.
Hoegh-Guldberg O. Coral Reefs and climate change prognosis? SEB Conference / Thermal Biology of
Coral Reefs, University of Kent, Canterbury, April 5.
Hoegh-Guldberg O. Coral Reefs and Environmental Change: Workshop for Cook Islands Government,
University of Queensland, CRTR GEF Program, September 11.
Hoegh-Guldberg O. Global ideas and networks: Opportunities and challenges in the international science
arena. Plenary talk at INORMS Internationalization of Research Conferences, Brisbane Convention Centre,
August 23.
Hoegh-Guldberg O. Global Warming and Coral Reefs: All over, except for the singing? University of Texas,
Texas, November 21.
Hoegh-Guldberg O. Great Barrier Reef Research Foundation dinner, Dinner address to Board, Customs
House, Brisbane, May 11.
Hoegh-Guldberg O. IOC-UNESCO Working Group on Coral Bleaching and Related Ecological Factors
(Bleaching Working Group). Opening talk at UNESCO-IOC, Paris, April 10.
Hoegh-Guldberg O. Sustaining the Marine Environment, Pioneering a sustainable Queensland Talk Series,
Queensland Museum, May 31.
Hoegh-Guldberg O. The Great Barrier Reef and Climate Change, UNESCO conference on climate change
and World Heritage sites, UNESCO headquarters, Paris, March 15.
111
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
Iglesias-Prieto R. Cambio climático global y blanqueamiento de coral. Simposio Cambio Climático Global
y sus Consecuencias en la Península de Yucatán, Mérida Yucatán, Mexico.
Iglesias-Prieto R. Thermal stress mechanisms in corals. Society for Experimental Biology Annual Meeting,
Canterbury, United Kingdom.
Iglesias-Prieto R. Arrecifes de coral y cambio climático global. Plenary 1st Congreso del Caribe: Naturaleza,
Sociedad y Desarrollo. Cozumel QR, Mexico.
Kaniewska P, Sampayo E*, Anthony K, Hoegh-Guldberg O*. Exploring factors affecting within colony light
attenuation at macro and micro scale in Stylophora pistillata. ACRS conference, Abstract, Mission Beach
QLD, Australia.
LaJeunesse T. The evolution of coral-zooxanthellae symbioses under the infl uence of climate change.
Congresso Mexicano de Arecifes de Coral. Cancun, Mexico March 28-30.
Lawton A, Hoegh-Guldberg O*. The effect of temperature on the photosynthetic and respiration rate of
reef building corals. ACRS conference, Abstract, Mission Beach QLD, Australia.
Loya Y. Fish net pen mariculture and the coral reefs of Eilat: a sad story. Palau Coral reef workshop, Koror,
Palau
Loya Y. The Coral Reefs of Eilat: Three decades of coral community structure studies. ARC Centre of
Excellence - second scientifi c annual board meeting, Sydney, Australia
Loya Y. Net pen fi sh farming and coral reefs: An unhappy marriage. ISRS (International Society for Reef
Studies) European Meeting, Bremen, Germany
Marion GS, Hoegh-Guldberg O*, McCulloch MT. Nitrogen isotopes (Ð15N) in coral skeleton: Assessing
provenance in the Great Barrier Reef Lagoon. Geochimica et Cosmochimica Acta 70:13 (From the
Goldschmidt International Geochemistry conference, Melbourne).
Marion GS, Hoegh-Guldberg O*, McCulloch MT, Jupiter SD. Coral Isotopic Records (Ð15N) of
Unprecedented Land Use Stress in Great Barrier Reef Coastal Communities. Proceedings of the 2006 AGU
Ocean Sciences Meeting, Honolulu, Hawaii.
Marion GS, Hoegh-Guldberg O*, McCulloch MT, Mucciarone DM, Dunbar RB. Isotopes (Ð15N) in coral
skeleton: A proxy for historical Great Barrier Reef water quality. Annual Australian Coral Reef Society
Conference, Mission Beach, QLD.
Marion, GS, Hoegh-Guldberg, O*, Jupiter SD, McCulloch MT. Coral isotopic records (Ð15N) of
unprecedented land-use stress in Great Barrier Reef coastal communities. ACRS conference, Abstract.
McClanahan T*, Ateweberhan M *, Muhando C, Maina J, Mohammed SM. Effects of climate and seawater
temperature variation on coral bleaching and mortality. International Society for Reef Studies, European
Meeting, Bremen, Germany.
Schuttenberg H, Corrigan C, McLeod L, Marshall P, Setiasih N, Obura D *, Hoegh-Guldberg O*, Causey B,
Drew M, Hansen L, Grimsditch G, West J, Skeat A, Eakin M, McCook L, Crawford M, Kramer P, Campbell
S. Building resilience into coral reef management: Key fi ndings & recommendations," In ICRAN and ICRI.
2007. Proceedings of the 3rd International Tropical Marine Ecosystems Management Symposium
(ITMEMS3), Cozumel, Mexico October16-20.
van Woesik R. Data, sampling and experimental design for coral reef monitoring. Palau International Coral
Reef Center, Palau, Micronesia.
van Woesik R. Response of coral populations to thermal stress. Seminar at the Intergovernmental
Oceanographic Commission (IOC) head offi ce in Paris, France.
van Woesik R. Response of coral reefs to thermal stress, Smithsonian Institute, Ft. Pierce, USA.
van Woesik R. Response of reef corals to thermal stress: toward a predictive ecology. Seminar at the
University of Miami, Miami, USA.
112
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
van Woesik R. The future of coral reefs, Department of Biological Sciences, Florida Institute of Technology,
USA.
van Woesik R. The future of coral reefs. 2nd Annual Coral Reef Conservation and Management Conference,
Miami, USA.
van Woesik R. Why we need to sample coral reefs. Environmental Protection Authority, Saipan.
Wild C. Overview on the GEF/Worldbank/IOC-UNESCO Coral Reef Targeted Research and Capacity
Building for Management Project". Talk to UNESCO staff within the workshop Ecological and Socio-
Economic Monitoring for Coral Reefs, Paris, France.
Wild C. Coral spawning stimulates microbial life in the reef. International Society for Reef Studies European
Meeting, Bremen, Germany
Wild C. Corals as ecosystem engineers ecological feedback scenarios after thermal stress and coral
bleaching events. Society for Experimental Biology Annual Meeting, Canterbury, United Kingdom.
113
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
2005
Bythell J*, Pantos O. Culture-independent analysis of microbial associates of coral disease. Estuarine
Research Federation, Special session on Coral Diseases: An Increasing Threat to Coral Reefs Worldwide,
Virginia, USA
Bythell J*, Pantos O. Experimental analysis of bacterial ecology of bleaching and disease. Integrated
research on coral bleaching and disease theme, Understanding the Stress Responses of Reef Corals,
Instituto de Ciencias del Mar y Limnología, UNAM, Mexico.
Fitt W. Understanding the stress response of corals and Symbiodinium in a rapidly changing environment
Coral Reef. Targeted Research Group on Coral Bleaching, Unidad Académica UNAM, Puerto Morelos,
Mexico.
Gates R. Developing Tools for Assessing Land Based Pollution in Corals. Environmental Protection Agency,
Honolulu, Hawaii
Gates R. Why do Corals Lose Their Symbionts in Response to Environmental Disturbances? California State
University, Northridge, USA
Gates R. Why do Corals Lose Their Symbionts in Response to Environmental Disturbances? Department of
Marine Science, University of Hawaii at Hilo, Hawaii
Hoegh-Guldberg O. Challenges for tourism in a warming world. Responding to coral bleaching and climate
change. Australian Reef Tour operator's workshop, Cairns, Australia.
Hoegh-Guldberg O. Climate change and Australia's coral reefs. Participant in joint workshop on challenges
for the Great Barrier Reef at the Davos leadership retreat, Hayman Island Resort, August.
Hoegh-Guldberg O. Climate change and coral reefs - the burning issues. Invited seminar, Weizmann
Centre, Israel June 3.
Hoegh-Guldberg O. Coral reefs in 2050: Life in a warm acid sea. Plenary, Australian Ecological Society,
Brisbane, Australia.
Hoegh-Guldberg O. Coral reefs in a warming, acidifying ocean. Invited seminar to Intergovernmental Panel
on Climate Change, Canberra, Australia March 13.
Hoegh-Guldberg O. Coral-algal symbiosis in a changing environment. Invited Seminar, Interuniversity
Underwater Institute, Eilat, Israel, June 3.
Iglesias-Prieto R. Coral bleaching in the Mesoamerican Barrier Reef. Tulum +8 Scientifi c Symposium,
Cancún QR, México.
Iglesias-Prieto R, Enríquez S, Méndez E. Enhanced absorption of solar radiation by symbiotic dinofl agellates:
the role of multiple scattering by coral skeletons. American Society of Limnology and Oceanography,
Summer meeting, Santiago de Compostela, Spain.
Loya Y. The Coral Reefs of Eilat: Three decades of coral community structure studies. Ilanit Congress of the
Federation of the Israel Societies for Experimental Biology (FISEB), Eilat, Israel.
Marion G, Jupiter S, Hoegh-Guldberg O*, McCulloch M. Mackay Whitsunday quality and coral-mangrove
ecosystem linkages since European colonization. The Mackay Whitsunday Healthy Waterway Forum
(MWNRM). Keynote Speaker, Sarina, Australia.
McClanahan T, Joshep Maina, R Moothien-Pillay, Andrew Baker. Effects of geography, taxa, water fl ow, and
temperature variation on coral bleaching intensity in Mauritius. Western Indian Ocean Marine Science
Association, Biannual Meeting, Blue Bay, Mauritius.
van Woesik R. Coral spawning, monitoring and future research directions of Palau. Palau International Coral
Reef Center, Palau.
114
* Denotes BWG members, researches and/or students when external authors are also included.
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Invited presentations
van Woesik R. Field methods for the coral reef targeted research and capacity building for management
working groups (GEF-World Bank project): toward commonality and complementarity.' World Bank,
Washington DC, USA.
van Woesik R. Mechanisms forcing coral population changes. National Institute of Marine Sciences,
Zanzibar, Tanzania
van Woesik R. Thermal stress on coral reefs: toward a predictive ecology. Dauphin Island Research Station,
University of Alabama, USA.
Wild C. IOC-UNESCO activities related to coral reefs. Summary report to Ocean Sciences Section/IOC
advisory group, Paris, France.
115
* Denotes BWG members, researches and/or students when external authors are also included.
Co-fi nancing
Activity associated with the Bleaching Working Group
was extended through project funding attracted from a
number of other sources. This funding contributed
signifi cantly to the proposed projects. The following
outlines sources of co-fi nancing research (in USD) which
supported the Bleaching Working Group:
Photo: A. Zvuloni
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
Co-fi nancing
Australian Research Council Grant (CE0561435) ARC Centre of Excellence -Innovative science for
sustainable management of coral reef biodiversity-. Investigators: Prof Terence Patrick Hughes, Ove Hoegh-
Guldberg and 32 other researchers ($1.9 million to O. Hoegh-Guldberg, 2005-2007; www.coralcoe.org.au).
Australian Research Council Grant (LP0562157) "New tools for managing ecosystem responses to
climate change on the southern Great Barrier Reef." Principle Researcher: Ove Hoegh-Guldberg,
Co-researchers: Kenneth Roald Nies Anthony, Andrew Bakun, Bradley Charles Congdon, Michael Julian
Caley, Sophie Dove, Gene Carl Feldman, Malcolm Lewis Heron, Ronald Johnstone, Andrew K Krockenberger,
Laurence John McCook, Alan E Strong, Paul Marshall. Partner: NOAA, GBRMPA ($1.3 million, 2005-2009).
Edwin W. Pauley Summer Program in Marine Biology. Pauley Foundation provided $117,000 to support
workshop 12 "The Biology of Corals: Developing a Fundamental Understanding of the Coral Stress
Response". June 2 to July 15, 2007. (See details at http://www.hawaii.edu/HIMB/Education/pauley2007.
html).
Intergovernmental Oceanographic Commission (IOC) of UNESCO provided a total of $60,000 over the
fi rst three years of the project. This money assisted censuses meetings and also supported workshops
2 and 7.
Packard Foundation Grant "Managers tool package for assessing coral Reef community responses under
environmental stress." Principle Researchers: Ken Anthony and Ove Hoegh-Guldberg. ($240,000;
2007-2009).
Smart State Research Facilities Funding For a Queensland Marine Science Centre; Hoegh-Guldberg
secured this grant that led to funding to support CRTR project infrastructure at St Lucia ($2.55 million) and
on Heron Island (0.5 million). 2005 ($3.0 million).
Israel Science Foundation (ISF) "An integrative approach of studying bacterial coral bleaching in the coral
reef of Eilat". Principle Researchers: Yossi Loya and E. Rosenberg (US $ 220,000; 2003-2007).
Israel Science Foundation (ISF) "Etiology of Black Band Disease (BBD)" Principle Researchers: Yossi Loya
and E. Rosenberg (US $ 220,000; 2007-2011).
Raynor Chair for Environmental Conservation Research (Y. Loya) supporting research of graduate
students in Zanzibar (US $ 100,000; 2004-2009).
Natural Environment Research Council (UK) research grant to address impacts of bleaching on microbial
ecology and disease susceptibility of reef corals, based at Heron Island CoE. Principal investigators: John
Bythell, Ron Johnstone, Olga Pantos, Clare Lanyon, Tony O'Donnell ($666,846; 2008-10).
Natural Environment Research Council (UK) two PhD research studentships to investigate bacterial
colonisation of coral surfaces at Heron Island CoE (Mike Sweet) and coral innate immunity (Caroline Palmer).
Principal Investigator: John Bythell. ($184,000; 2008-10).
The Leverhulme Trust (UK) research grant to assess mucin gene expression and mucus dynamics of reef
corals, based in Phuket, Thailand and Heron Island CoE. Principal Investigators: John Bythell, Barbara
Brown, Jeff Pearson and Nick Morris. ($313,862, 2006-09).
National Science Foundation (NSF) "Reef corals: symbiotic dinofl agellate/host combinations and their
physiological response to environmental change". Principle Researchers: William Fitt and Schmidt (Plant
Sciences). ($698,846; 2002-09).
National Science Foundation (NSF) Supplement to "Reef corals: symbiotic dinofl agellate/host
combinations and their physiological response to environmental change". Principle Researchers: William
Fitt and Schmidt (Plant Sciences) co-PI. ($5000; 2004).
German Research Foundation (Wi 2677/2-1a) "Element cycles in warm and cold water coral reefs The
function of organic coral exudates" Principle Researcher: Christian Wild; Co-researchers: Malik Naumann,
Florian Mayer, Wolfgang Niggl, Carin Jantzen ($ 0.8 million; 2006-2010).
German Research Foundation (Wi 2677/2-1b) "Coral reefs in a time of change: Biogeochemical
consequences of phase shifts" Principle Researcher: Christian Wild; Co-Researchers: Andreas Haas, Verena
Witt, Christian Neukäufer ($ 0.4 million; 2007-2010).
117
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Photo: T. McClanahan
Bleaching and Related Ecological Factors:
CRTR Working Group Findings 2004-2009
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127
The CRTR Program is a partnership between the Global Environment Facility, the World Bank, The University of Queensland
(Australia), the United States National Oceanic and Atmospheric Administration (NOAA) and approximately 50 research
institutes and other third-parties around the world.
Document Outline
- Contents
- Foreword
- Introduction
- Research directions
- Member biographies
- Glossary
- Scientific outcomes
- Theme 1 Coral-symbiont responses to thermal stress
- Project 1.
- Project 2.
- Project 3.
- Project 4.
- Project 5.
- Theme 2 Organismal mechanisms to ecological outcomes
- Theme 3 Biomarkers of stress
- Theme 4 Projections of change and socio-economic impact
- Management implications
- Contributions to policy development
- Research training
- Workshops and outreach
- Conclusions and future research
- Research themes for the future
- Invited presentations
- Co-financing
- References cited